| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0799 |
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| Symbol | |
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| ID | 3966398 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 1042885 |
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| End bp | 1043703 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637919861 |
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| Product | sigma-24 (FecI-like) |
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| Protein accession | YP_526273 |
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| Protein GI | 90020446 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAACG CCCAAACAAT CGCATCTGCG CAAGCGGGTG ACCGAGCCGC CTTCAGCCAA
CTTATTGCAG AAAGTGCCAC CCCTTTGCGA GCGGTTATTC GGCGCATGGT TGGTCACCCA
GACGATACCG AAGAGCTCTA CCAAGATACC CTGCTAAAAG CTTGGCAAAA AATAGCCAGC
TATCGCGCAG ATGCTTCGTT TAGTACATGG CTTTGCGCTA TTGGCGCTCG TACAGCCCTC
GACTTTTTAC GGGCGCAAAA ACCTTGGCGA GAACGCGCCC AAATAGCCTA TGGCAATGAA
TGCGCAACCG ACCCCGACCT AGGTGCAGAA GTGCTGGCGA CGCTTTCGGA GCCGAGCTTT
ACCTTTGATG TACACGAACA TATTGCTTAT TGCTTTGCCT GCGTGGGCCG CTCACTACCC
GCGGAGCAAC AAGCGGCACT GGTATTGCGC GAAGTGCTCG AACTTTCTGC CAAGGAAGCA
GCCGAGGCTC TTGCGCTCAC AGAGTCCGTT TTCAAACATC ACCTTAGCGC CGCCCGCAAA
ACAATGACAA CAGCATTTGA CAGCCTGTGC TCGCTGGTTA ATAAAAACGG TGTGTGCTAT
CAATGTAAAG GCCTGCGCAT GGCCAGCAGC AACAGCGCAC ACGAAAAAAC AGACACCATC
GATAATTTAG ACGAGCGAAT TAAACTCATT CGCACGGTGA ATTTAGATAG TGGCGTTAGC
AAAGTTATGC ACGATTTATT TTGGCGACGA ACAGCCGAAT TTGAAGCAAC CGGCCGCGGT
AATTGCGAGC AACAATCCCA CTGCGGACGA AAAAATTAA
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| Protein sequence | MSNAQTIASA QAGDRAAFSQ LIAESATPLR AVIRRMVGHP DDTEELYQDT LLKAWQKIAS
YRADASFSTW LCAIGARTAL DFLRAQKPWR ERAQIAYGNE CATDPDLGAE VLATLSEPSF
TFDVHEHIAY CFACVGRSLP AEQQAALVLR EVLELSAKEA AEALALTESV FKHHLSAARK
TMTTAFDSLC SLVNKNGVCY QCKGLRMASS NSAHEKTDTI DNLDERIKLI RTVNLDSGVS
KVMHDLFWRR TAEFEATGRG NCEQQSHCGR KN
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