| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0786 |
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| Symbol | |
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| ID | 3965839 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 1014924 |
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| End bp | 1015964 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637919848 |
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| Product | arabinan endo-1,5-alpha-L-arabinosidase |
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| Protein accession | YP_526260 |
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| Protein GI | 90020433 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3507] Beta-xylosidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000000141301 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.447167 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTAACA AAAACAAACG CCCAATTACA TTCGCTTTAG TCGTTAGCCT CTTAGCCCTG
CTTGCCCTTG CAGGCTGCAG CGAGGCAAAA CAAGTAAGCA TCCACGACCC AGTAATGATT
AAAGAAGGTG ACACCTACTA CTTGTTTAGC ACTGGCCCCG GCATAACAAT GTATAGCTCT
AGCGATATGA AAAACTGGCG CCGCGAAGGC GAAGTATTTA ATCAAGCCCC TAGTTGGGCC
TCCAACGCCG TACCCTATTT TAAAGGCCAC CTGTGGGCAC CCGACATCAT TGAAAAAGAT
GGTCTGTTTT ACCTCTACTA TTCTGTGTCT GCTTTTGGAA AGAACACATC CGGCATTGGC
GTTACCGTAT CGCCCACGCT TAACCCACGC GCGCCCAATT ACGGTTGGCA AGATAAAGGC
ATGGTATTGC GCAGCGTGCC TGAGCGCGAC GAGTGGAACG CTATCGACCC CAATATTGTG
GTAGATAACA ACGGCACCGC ATGGATGGCT TTTGGCTCCT TTTGGCAAAG CTTAAAAATG
GTGGCACTAG ACAGCAGCTG GACAAAAATA GCTGAGCCTC AACAGTGGCA TACCATAGCA
GCCTTACCCA AAGGCAGTAT GCCCACAGGC GACGCAGTAA AGGACGGCGA AATAGAAGCT
CCTTTTATTT TTAAAAAGAA CGACGATTAC TTTTTGTTTG TAAGTTGGGG TAAATGCTGC
CGCAAAGATG AAAGCACCTA CCGCCTAGCA ATGGGCCGCA GCAAAAATAC TACCGGTCCA
TTCTTAGATA AAAACGGCAA AGACCTCGCC CAAGGTGGTG GCACCCTATT AATAAGTGGC
AACAAAAACT GGCCCGGCTT AGGCCACAAC AGCGCCTACA CCTTCGACGG CAAAGATTGG
CTTGTGCTAC ACGCCTATGA ATCTGCAGAT AACGGTTTAC AAAAACTAAA AATATTAGAA
ATAAACTGGG ATAAAGACGG CTGGCCAACT GTAGATACCA AAGAACTGGA TGAGTTTGTT
AGTATTGAAT TAACTCAATA A
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| Protein sequence | MLNKNKRPIT FALVVSLLAL LALAGCSEAK QVSIHDPVMI KEGDTYYLFS TGPGITMYSS
SDMKNWRREG EVFNQAPSWA SNAVPYFKGH LWAPDIIEKD GLFYLYYSVS AFGKNTSGIG
VTVSPTLNPR APNYGWQDKG MVLRSVPERD EWNAIDPNIV VDNNGTAWMA FGSFWQSLKM
VALDSSWTKI AEPQQWHTIA ALPKGSMPTG DAVKDGEIEA PFIFKKNDDY FLFVSWGKCC
RKDESTYRLA MGRSKNTTGP FLDKNGKDLA QGGGTLLISG NKNWPGLGHN SAYTFDGKDW
LVLHAYESAD NGLQKLKILE INWDKDGWPT VDTKELDEFV SIELTQ
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