| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0781 |
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| Symbol | |
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| ID | 3965834 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 1011166 |
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| End bp | 1011660 |
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| Gene Length | 495 bp |
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| Protein Length | 164 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637919843 |
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| Product | XRE family transcriptional regulator |
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| Protein accession | YP_526255 |
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| Protein GI | 90020428 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.0290139 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0967934 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTAATTA GAAAACTTAG ACTAGACAGA GGAATATCCC AAGAACAGCT TGCTGAGGCA
ACCGGACTAA GCATTCGCAC TATCCAGCGT GTTGAAGCCG GTCACCGGGT AAGCTATGCA
TCACTTCGGG TTCTTGCTGC GACATTTAAT ATAAACGTCG ACGCCCTTGA GCAAGCGCTA
TATGCAATGA ATACTTCAAC AAATGAATAC ATAGAGAAAC CACTTTGGGT AAGGCTAGTT
CTGAGCCTGC CGTCATTACG TGGCTTAGAT CGGCCCAGCT TGTTAAAGCA TGAGGTTTGC
CTTGTAGGTT ATGCGTTTTT CGCTTATGTA GCATCCTACC TTATTCCCAG TGTAGAAACT
TTTTATTGGA ATCTAACAAC TGTAGATCTA TTGCATTTCA GCGCGTTCTC GGCGTTATTT
CTTGCCTATA TCTCTTCGAT CATTCCTAGA CTAAGGGAAA ATTCCAAAGA GCGTAACCCC
ACCCTCCCAA AGTAA
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| Protein sequence | MLIRKLRLDR GISQEQLAEA TGLSIRTIQR VEAGHRVSYA SLRVLAATFN INVDALEQAL
YAMNTSTNEY IEKPLWVRLV LSLPSLRGLD RPSLLKHEVC LVGYAFFAYV ASYLIPSVET
FYWNLTTVDL LHFSAFSALF LAYISSIIPR LRENSKERNP TLPK
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