Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_0775 |
Symbol | |
ID | 3965828 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 1000437 |
End bp | 1001393 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637919837 |
Product | transaldolase B |
Protein accession | YP_526249 |
Protein GI | 90020422 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0176] Transaldolase |
TIGRFAM ID | [TIGR00874] transaldolase |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.38826 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0662498 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAGTA ATCAATTAGA TCAACTAAAA GCGCTAACCA CTGTTGTAGT CGACAGTGGT GATATCAATG CAGTGGCACG CTACCAGCCA GAGGATGCAA CCACCAACCC ATCGCTTGTA CTAAAAGCAA TCGAACAGCC TGAGTACAAT CATTTAGTTG CACAAGCTGT AGCGTGGGCT AAAGAATTTG CAAAAGATAA ACCTCTGGTA ACGGCAACAG CCGATAAACT TGCGGTTATG CTGGGTTGCG AAATCCTTAA GCATATACCT GGTAGAGTAT CTACTGAAGT GGATGCGCAC TTATCGTTCA ACACCGAAGC GACTATCGCC AAAGCATTAG AGCTGGTTGC AATGTACGAG CAAGCGGGTG TAGATAAGTC GCGTATCTTA ATTAAAATTG CCTCCACTTG GGAGGGCATT CAAGCTGCGA AACAGCTAGA GAAAATGGGC ATTCAATGTA ACCTAACGCT ATTATTCGGT TTTGCTCAAG CGCAAGCGTG TGCCGAGGCG GGTGTGTTTT TAATTTCGCC ATTTGTGGGC CGTATTTTAG ATTGGTACAA AAAAGACCAA CCCAATGCCG ATTTTACAGG CTTAAACGAC CCCGGCGTTG TTTCAGTCAC TAAAATCTAT AACTTTTATA AAGCCTGTGG CTTTCAAACC GTTGTAATGG GCGCAAGCTT CCGCAATGTG GGTGAGCTTC AGTCGCTAGC AGGCTGTGAT CGACTCACCA TTAGCCCCGC CTTGTTAGAC GAGTTGCAAA ACCAAACTGC TCCTTTGGTA GCACTGCTTG TAGATAAAGG TGTAAGTGAA GAAAAGCCTG CGCCTCTTAC TGAAGGTAGC TTCCGTTGGG CAATGAACGA AGACCCAATG GCAACCGAAA AGTTAGCCGA GGGGATTCGC AATTTCGCTA AAGATCAGGT TAAGCTGTAC CGTCTTATTG AAAAAGTTGC AGGTTAA
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Protein sequence | MSSNQLDQLK ALTTVVVDSG DINAVARYQP EDATTNPSLV LKAIEQPEYN HLVAQAVAWA KEFAKDKPLV TATADKLAVM LGCEILKHIP GRVSTEVDAH LSFNTEATIA KALELVAMYE QAGVDKSRIL IKIASTWEGI QAAKQLEKMG IQCNLTLLFG FAQAQACAEA GVFLISPFVG RILDWYKKDQ PNADFTGLND PGVVSVTKIY NFYKACGFQT VVMGASFRNV GELQSLAGCD RLTISPALLD ELQNQTAPLV ALLVDKGVSE EKPAPLTEGS FRWAMNEDPM ATEKLAEGIR NFAKDQVKLY RLIEKVAG
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