| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0773 |
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| Symbol | araD |
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| ID | 3965826 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 997927 |
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| End bp | 998619 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637919835 |
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| Product | L-ribulose-5-phosphate 4-epimerase |
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| Protein accession | YP_526247 |
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| Protein GI | 90020420 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases |
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| TIGRFAM ID | [TIGR00760] L-ribulose-5-phosphate 4-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.000354298 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0588061 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAGCTACT TAGAGTTAAA GCGCGAAGCT TACGAAGCCA ACATGGAATT GCAGCGTCGC
AATTTAATTA TTTATACATG GGGTAACGTT TCGCAAATAG ATCGGGCTAA GGGCGTTATG
GCTATAAAAC CAAGCGGCGT ACCCTACGAA GAATTATTAC CAGAGCACAT GGTTATAGTG
GATATGGAAA ACAATATTGT AGAAGGGCAA ATGCGACCTT CTTCTGATAC TAAAACCCAT
ACTCATTTGT ATCGTCATTT CGAAACCATT GGCGGTGTTA CTCATACACA CTCCACTTAC
GCCACCGCGT GGGCGCAGGC CCAGGTAAGT ATTCCCTGCT TCGGTACTAC TCACGCCGAT
TTTGCCTACG GCGAAATACC TTGTACTGCG GTAATGAGCG ATGAACAAAT AGAGCGCGAC
TACGAAGAAG AAACCGGCGT GCAAATTACC GATGCATTTG CAGGTAAAAA CCCCGATGAA
GTGCCTATGG TAATTGTTGC CGGGCATGCG CCATTTACTT GGGGCAAAGA TGCGGCTAAA
TCGGTTTATC ACGCTGTGGT GCTCGAAGAA ATTGCGCGTA TGGCTTACCT GACTAAAACC
TTAAATACCC AACAAGCTTC CCTTAAGCAG GGCATTTTAG AAAAACATTA CCAGCGCAAG
CACGGCAAGA ACGCTTATTA CGGGCAGTCT TAA
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| Protein sequence | MSYLELKREA YEANMELQRR NLIIYTWGNV SQIDRAKGVM AIKPSGVPYE ELLPEHMVIV
DMENNIVEGQ MRPSSDTKTH THLYRHFETI GGVTHTHSTY ATAWAQAQVS IPCFGTTHAD
FAYGEIPCTA VMSDEQIERD YEEETGVQIT DAFAGKNPDE VPMVIVAGHA PFTWGKDAAK
SVYHAVVLEE IARMAYLTKT LNTQQASLKQ GILEKHYQRK HGKNAYYGQS
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