Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_0769 |
Symbol | |
ID | 3966213 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 993440 |
End bp | 994402 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637919831 |
Product | inner membrane ABC transporter permease protein YjfF |
Protein accession | YP_526243 |
Protein GI | 90020416 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.539322 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0929356 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATAAACA GAAAGTTTTT ACCCCTTTAC GTAACATGCA GTTTATTTTT GGCATTATTT TTAGCCGGTT CTGTGCAGTT CGATAACTTC TTTACATTGC GCGTGTTTGT TAATTTATTT ACCGATAACG CCTTTTTAAT TATTGCCGCA GTAGGTATGA CGTTTGTAAT TTTGTCTGGC GGTATCGATC TTTCTGTCGG CTCTGTTATT GCGTTAACGG GTGTAGTGGT TAGTGTCTTG CTCGAAAATT ATCAGTGGCA CCCGCTGGCC GCCTTTGCAG TTGTATTAGT GGGTGGTACC GTATTTGGCG CAGCAATGGG GGCAATTATT CATTTTTATA AATTGCAGCC ATTTATTGTT ACCTTGGCAG GTATGTTTTT TGCGCGCGGT TTAAGCACTA TTATTAGTGA AGAATCTGTG CCAATCACCC ACGAGTTTTA CGACGACGTA AGCATGTTTG GCTTTGAACT GCCCGGCAAC GCTTGGTTAG ATGCGTCCAC CATTATCAGT ATTGTTGTGC TAGTGGCGGC AATAATAATT GCCAATTACA CCCGCTTTGG TGGCCGTGTT TACGCGTTGG GTGGCGATGC GCAGTCGGCG GGTTTAATGG GTGTACCTAT CGCTCGTACT ACCATTAGTG TTTACGCATT TAATTCTTGT TTGGCTGCGT TGGCGGGTAT TGTTTTTTCT TTTTATACCT TTTCGGGCTA TTCGTTGGCC GCAGTAGGGG TAGAGCTAGA TGCTATAGCC GCAGTGGTTA TTGGCGGTAC GCTACTTACC GGTGGTTACG GCTATGTGGT GGGCACCTTA TTTGGTGTAC TTATTATGGG CGTTGTGCAA ACTTACATTT CGTTCGATGG TACGTTAAGT AGCTGGTGGA CGAAAATAGT AATAGGTGTG CTTTTGTTTT GCTTTATAGC ATTGCAGCGA ATATTGGTGG CGCCGGGCGC AAAAACTCGT TAG
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Protein sequence | MINRKFLPLY VTCSLFLALF LAGSVQFDNF FTLRVFVNLF TDNAFLIIAA VGMTFVILSG GIDLSVGSVI ALTGVVVSVL LENYQWHPLA AFAVVLVGGT VFGAAMGAII HFYKLQPFIV TLAGMFFARG LSTIISEESV PITHEFYDDV SMFGFELPGN AWLDASTIIS IVVLVAAIII ANYTRFGGRV YALGGDAQSA GLMGVPIART TISVYAFNSC LAALAGIVFS FYTFSGYSLA AVGVELDAIA AVVIGGTLLT GGYGYVVGTL FGVLIMGVVQ TYISFDGTLS SWWTKIVIGV LLFCFIALQR ILVAPGAKTR
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