| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0767 |
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| Symbol | |
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| ID | 3966211 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 990871 |
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| End bp | 992376 |
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| Gene Length | 1506 bp |
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| Protein Length | 501 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637919829 |
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| Product | putative sugar uptake ABC transporter ATP-binding protein |
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| Protein accession | YP_526241 |
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| Protein GI | 90020414 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.162932 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGACC AAAATCCGCT ACTTGCCCTT CGTGGTGTGG GTAAGGTATT CCCCGGTGTG
ATTGCTTTGC AAGGGGTAGA TTTTACTTTG CGCGCGGGCG AGATACACGC CTTGCTTGGC
GAAAATGGTG CGGGTAAATC TACCCTTATT AAAGTAATGA CTGGTGTATA TCAAAAAGAT
AGCGGCAGTA TTGCATTTAA AGGTGAAAAT ATTCACCCCA CCTGTACGGG CGATGCGCAA
GCCTTGGGTA TTAGTACGGT ATACCAAGAG GTGAACTTAC TGCCTAACTT AAGCGTTGCA
CACAACGTTT ACTTAGGCCG AGAGCCGCGC AAATTTGGTT TGATTAATTG GAAAAAAATT
AATCGAGATG CAGCAGAGCT ATTAAAAGGT TACAACTTAA ATATAGATGT TACCAAGCCC
CTTTCACATT ATTCGGTTGC CGTACAACAA CTTATTGCTA TTGCGCGCGG TGTGGATATG
TCCTCCGGTG TACTTATTTT AGATGAGCCA ACCGCAAGTT TAGATGCTGG TGAAGTGCAG
GCTTTATTTA AAGTGATGCG CGAAATTGCT GCCAAGGGTA TTGGTATTGT TTTTGTTACC
CATTTTCTCG ATCAGGTGTA CGCCGTGTGC GACCGCATAA CAATATTGCG CAACGGCACA
TTGGTGGGCG AATGGCTGGC CAAAGATTTA TCGCAGCACG ATCTTGTGAG CAATATGCTT
GGTAAAGAAA TTGCACATTC CAGTAAAACC ACGCCTGTGC AGCAAGACGA AAACGAGCAG
GGTGAGGCGC TACTTGCGTT ACAACAAGCC GCAGCCAAAG GCTCGGTGGA GCCACTAAGT
GTGTCGGTTA AGGCGGGCCA AGTGCTGGGT TTAGCTGGGT TACTGGGCAG TGGGCGCACA
GAGTTATGCA AGTTGGTGTT TGGTGTAGAT GCGCTAAATG AAGGCGACAT TCTTTTAAAC
GGCAAACCGG TTAAATTTAA ACACACGCGC GAAGCCGTAT TGGCGGGTAT GGGGTTGTGC
CCCGAAGATC GCAAACACGA CGGTATATTT GGGCCAATGT CCATCCGCGA AAACATGATT
ATCGCGCTGC AAAACAAGCG CGGCTGGTGG AAATATATTC CCCTTAAAAA ACAAAAAGAG
TTGGCCGAGC ACTACGTTAA AGCTTTAAAA ATTGCCACAT CCGATATCGA AAAACCCATA
GAGCAGCTAA GCGGTGGCAA TCAACAAAAA GTCATTCTCG CCCGCTGGTT AGCGTCAGAG
CCAGTACTTT TGTTATTGGA TGAGCCAACC CGCGGTATTG ATGTAGGCGC ACACGCAGAA
ATTATTGCGC TTATTCGTCA GTTGTGTGAG CAGGGCCTGG GCCTTGTGGT GGCTTCTTCC
GAGCTGGAAG AGCTAGTGGC CTTTAGCGAT AAAGTATTAG TGCTGCGCGA CAGAAAAAAA
GTGGCAGAAA TATCTGGCAG CCAAATTAAT CAGCAAAACA TTATGCAAGC CATTGCTGGC
AGTTAA
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| Protein sequence | MTDQNPLLAL RGVGKVFPGV IALQGVDFTL RAGEIHALLG ENGAGKSTLI KVMTGVYQKD
SGSIAFKGEN IHPTCTGDAQ ALGISTVYQE VNLLPNLSVA HNVYLGREPR KFGLINWKKI
NRDAAELLKG YNLNIDVTKP LSHYSVAVQQ LIAIARGVDM SSGVLILDEP TASLDAGEVQ
ALFKVMREIA AKGIGIVFVT HFLDQVYAVC DRITILRNGT LVGEWLAKDL SQHDLVSNML
GKEIAHSSKT TPVQQDENEQ GEALLALQQA AAKGSVEPLS VSVKAGQVLG LAGLLGSGRT
ELCKLVFGVD ALNEGDILLN GKPVKFKHTR EAVLAGMGLC PEDRKHDGIF GPMSIRENMI
IALQNKRGWW KYIPLKKQKE LAEHYVKALK IATSDIEKPI EQLSGGNQQK VILARWLASE
PVLLLLDEPT RGIDVGAHAE IIALIRQLCE QGLGLVVASS ELEELVAFSD KVLVLRDRKK
VAEISGSQIN QQNIMQAIAG S
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