Gene Sde_0757 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_0757 
Symbol 
ID3966201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp976128 
End bp976934 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content45% 
IMG OID637919819 
Producthypothetical protein 
Protein accessionYP_526231 
Protein GI90020404 
COG category[S] Function unknown 
COG ID[COG1723] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.186442 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCACC GTATAATTGG CCAATGTTTG GCGAAGAAAT TCGACCTGCC TGCGTTGCGC 
AGGCAACTAT CCGACGAGAA TTATTCCAAG CGCTATAAAG ACTGCTGGGT AGTTAACCGC
TTAGCCGGCA CACTTTTTAT TTTCGATTAC GGCACCGTTG TCGAATGGTC CAACCCCCGT
GAGCCCGTTA GCGATTCACC CGAAGCCTGC CTAGATCAAT TCGACTGGCT ACTGCCATTT
GCAATAGACC CACTCGACAA AGCAGAAAGC GACCAGTTTT CGTTTAGCAC TTCCGACACG
TTCCGTATCC ACGAAGATCA TATCTACATG GATAATAACG AGCCGCTTAC CCTTTTGGCC
GTTAGCCACG GTATTGCGCA AAGCTGCAAA CTTGCCAGTT TTGAGTCGCG CGTGCTCGCT
CTACTGAATG AAAACGACAT AATTGCAGAC CAGCTTGTGC AGTATGGCAC CATTAAAATG
TCGTCTAAAA AAATTGCCAA ATTGCGCGGG CAGCTGTTTA AAGCAAAGAG CGATATTATT
TTAAAGTTTG ATTTACTCGA CGTGCCAGAG TTTTTTTGGG AATACCCCGA ACTTGAAAGC
TACTACCAAA GCATATCGCG CTACCTTGAA CTGCCGCCGA GATTAGCGCT AATTCAACAA
AAAATAGATA CCCTAGGTGC TCTGCTTTCA ATGCTAGGCG ACGAACAAAA GCATCACCAC
TCGTCCTTTT TAGAGTGCAT AATCATCGCG TTAATTGCAG TTGAAATTGT TATTTTTCTC
GGCCACGACT TACTTAAGCT ATTTTAG
 
Protein sequence
MTHRIIGQCL AKKFDLPALR RQLSDENYSK RYKDCWVVNR LAGTLFIFDY GTVVEWSNPR 
EPVSDSPEAC LDQFDWLLPF AIDPLDKAES DQFSFSTSDT FRIHEDHIYM DNNEPLTLLA
VSHGIAQSCK LASFESRVLA LLNENDIIAD QLVQYGTIKM SSKKIAKLRG QLFKAKSDII
LKFDLLDVPE FFWEYPELES YYQSISRYLE LPPRLALIQQ KIDTLGALLS MLGDEQKHHH
SSFLECIIIA LIAVEIVIFL GHDLLKLF