Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_0757 |
Symbol | |
ID | 3966201 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 976128 |
End bp | 976934 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637919819 |
Product | hypothetical protein |
Protein accession | YP_526231 |
Protein GI | 90020404 |
COG category | [S] Function unknown |
COG ID | [COG1723] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.186442 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTCACC GTATAATTGG CCAATGTTTG GCGAAGAAAT TCGACCTGCC TGCGTTGCGC AGGCAACTAT CCGACGAGAA TTATTCCAAG CGCTATAAAG ACTGCTGGGT AGTTAACCGC TTAGCCGGCA CACTTTTTAT TTTCGATTAC GGCACCGTTG TCGAATGGTC CAACCCCCGT GAGCCCGTTA GCGATTCACC CGAAGCCTGC CTAGATCAAT TCGACTGGCT ACTGCCATTT GCAATAGACC CACTCGACAA AGCAGAAAGC GACCAGTTTT CGTTTAGCAC TTCCGACACG TTCCGTATCC ACGAAGATCA TATCTACATG GATAATAACG AGCCGCTTAC CCTTTTGGCC GTTAGCCACG GTATTGCGCA AAGCTGCAAA CTTGCCAGTT TTGAGTCGCG CGTGCTCGCT CTACTGAATG AAAACGACAT AATTGCAGAC CAGCTTGTGC AGTATGGCAC CATTAAAATG TCGTCTAAAA AAATTGCCAA ATTGCGCGGG CAGCTGTTTA AAGCAAAGAG CGATATTATT TTAAAGTTTG ATTTACTCGA CGTGCCAGAG TTTTTTTGGG AATACCCCGA ACTTGAAAGC TACTACCAAA GCATATCGCG CTACCTTGAA CTGCCGCCGA GATTAGCGCT AATTCAACAA AAAATAGATA CCCTAGGTGC TCTGCTTTCA ATGCTAGGCG ACGAACAAAA GCATCACCAC TCGTCCTTTT TAGAGTGCAT AATCATCGCG TTAATTGCAG TTGAAATTGT TATTTTTCTC GGCCACGACT TACTTAAGCT ATTTTAG
|
Protein sequence | MTHRIIGQCL AKKFDLPALR RQLSDENYSK RYKDCWVVNR LAGTLFIFDY GTVVEWSNPR EPVSDSPEAC LDQFDWLLPF AIDPLDKAES DQFSFSTSDT FRIHEDHIYM DNNEPLTLLA VSHGIAQSCK LASFESRVLA LLNENDIIAD QLVQYGTIKM SSKKIAKLRG QLFKAKSDII LKFDLLDVPE FFWEYPELES YYQSISRYLE LPPRLALIQQ KIDTLGALLS MLGDEQKHHH SSFLECIIIA LIAVEIVIFL GHDLLKLF
|
| |