| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0749 |
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| Symbol | |
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| ID | 3966270 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 965469 |
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| End bp | 966836 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637919811 |
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| Product | response regulator receiver domain-containing protein |
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| Protein accession | YP_526223 |
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| Protein GI | 90020396 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR02915] putative PEP-CTERM system response regulator |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAGTT CGGATAAACC AAAACTATTA ATTGTCGAAG ATGACTCTGG CTTACAAAGC
CAATTGCGCT GGCATTTTGA TCAATACGAA GTGGTTGCAG CAACTAACCG CGAAGAAGCT
ATTGCAGCGG TTCGCTTGCA CGAGCCCGCC ATTATTTTGC AAGACCTCGG CCTGCCGCCT
GATGATGAGG GCGTAGATGA AGGCTTTCGC TGTATACGCG AAATATCCAC GCTTTCGCCC
ACCACAAAAA TTATTGTAAT GACCGGCAAC GCCGATTATG AGAACGCAGT GCGCGCAGTT
GCCATGGGCG CCTACGACTT TTATCAAAAA CCGGTTAACA CCGATACACT CGATCTAATA
CTGCAACGCG CATTTCACAT CCATGAATTA GAACAGCGCA ATCGCATTTT GCAGGAGCAA
AAACAAGCTC CGCTGGACGG CGTAATAGCA TGCGATCCCA ATATGCTAAA AATTTGCCGC
ACCATAGAAA AGCTCGGGCC ATCGAATGTA ACTTGCACAC TTACCGGCGA AAGCGGTACC
GGTAAAGAAG TATTAGCAAA AGCACTGCAC AAGCTAAGCC CACGAGCAGA TAAACGCATG
GTGGCCATTA ACTGCGCTGC AGTGCCAGAA AACCTAATGG AAAGCGAGTT ATTTGGCTAT
GAGAAAGGCG CATTTACCGG CGCCAATAAA CGCACACTCG GTAAGGTAGA AACCGCAGCA
GGCGGCACTT TATTTTTAGA TGAAATTGGC GATATGCCGT TGGGCCTGCA AGCCAAGCTA
CTGCGCTTTT TACAGGAGCG GGTAATTGAG CGTGTAGGTG GCCGCGAAGA AATACCGGTA
GATGTGCGCG TGGTTTGCGC CACCAACAAA AACCTTAAAG AAATGGTCGC AGAAGGCACG
TTCCGCGAAG ATTTGTATTA TCGAATCTGC GAGATGGAAA TAAACATTCC GCCGCTGCGT
GACCGCTTTG GAGACAAACT CCTTTTAGCC CGTCACTTTT TATCTACCTT TACCGAGCAG
CAGGGCCGCA ATAATATTAC TGGCTTTTCA CCCGAAGCCA TTGAAGCGAT TGAAGCTTAC
GACTGGCCGG GCAATATTCG CGAAATGGAA AACCGTATTA AACGCAGCGT AGTGATGGCG
GATGACAAGT TAATAAGCTC GGAAGACTTA GGCTTGCTCA ACTCCGATGA ACTTACCATC
AACCTGCGAC AGGTACGCCA AACTGCAGAG CGCAATGCTA TATTGCGTGC ACTCGCCATG
ACCGAGAGCA ACATATCGGC TACGTCCAAA TTGCTAGGCG TTACTCGCCC TACGCTTTAC
GATTTAATGA AGAAATACAA TATTCAATCG TCTTCAATAG GCGAGTAA
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| Protein sequence | MSSSDKPKLL IVEDDSGLQS QLRWHFDQYE VVAATNREEA IAAVRLHEPA IILQDLGLPP
DDEGVDEGFR CIREISTLSP TTKIIVMTGN ADYENAVRAV AMGAYDFYQK PVNTDTLDLI
LQRAFHIHEL EQRNRILQEQ KQAPLDGVIA CDPNMLKICR TIEKLGPSNV TCTLTGESGT
GKEVLAKALH KLSPRADKRM VAINCAAVPE NLMESELFGY EKGAFTGANK RTLGKVETAA
GGTLFLDEIG DMPLGLQAKL LRFLQERVIE RVGGREEIPV DVRVVCATNK NLKEMVAEGT
FREDLYYRIC EMEINIPPLR DRFGDKLLLA RHFLSTFTEQ QGRNNITGFS PEAIEAIEAY
DWPGNIREME NRIKRSVVMA DDKLISSEDL GLLNSDELTI NLRQVRQTAE RNAILRALAM
TESNISATSK LLGVTRPTLY DLMKKYNIQS SSIGE
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