| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0746 |
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| Symbol | |
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| ID | 3966267 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 962024 |
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| End bp | 962710 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637919808 |
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| Product | ribulose-5-phosphate 3-epimerase |
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| Protein accession | YP_526220 |
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| Protein GI | 90020393 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0036] Pentose-5-phosphate-3-epimerase |
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| TIGRFAM ID | [TIGR01163] ribulose-phosphate 3-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCATCC CGCAAGCGAA ACGCGACTTT AAAATTGCCC CATCCATACT TTCTGCCGAT
TTTGCCCGTT TAGGCGAAGA AGTTGATGCC GTTTTAAAGG CAGGAGCCGA TTTTGTACAT
TTCGATGTAA TGGACAACCA CTACGTGCCT AACCTCACGT TTGGCCCTAT GGTGTGTAAG
GCGCTGCGCA ATTACGGTAT TACCGCACCT ATCGATGTGC ACCTTATGGT AGACCCTGTA
GATGATTTGG TGAAAACCTT CGCCGATGCG GGCGCTACCT ATATTTCGTT CCACCCCGAC
GCTTCGCGCC ATGCCGATCG TACCGTTAAA CTTATTCGCG ATTTGGGCTG CAAGCCGGGC
GTTGTGCTTA ACCCTGCAGT AACCCTTGAA TCGGTTAAGC ACCTGCTTGA TCAAGTAGAT
ATGTTGCTGC TTATGTCGGT TAACCCTGGG TTTGGTGGAC AAAAGTTTAT TCCTTACACC
TTAGATAAGT TAAAAGAGGC GCGTGCACGC TTGGATGACG CTGGCTTAGA GGCGCGTTTA
GAGGTAGATG GCGGCGTGTC GACGGCTAAC ATTGCCGATG TGGCGCGGGC GGGTGCCGAT
ACCTTTGTTG CCGGTTCCGC TATCTTCGGC GCGCAGAATT ACGAGTCCGT AATTAAGCAA
ATGCGTGATA CACTCGCTCA GCTATAA
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| Protein sequence | MSIPQAKRDF KIAPSILSAD FARLGEEVDA VLKAGADFVH FDVMDNHYVP NLTFGPMVCK
ALRNYGITAP IDVHLMVDPV DDLVKTFADA GATYISFHPD ASRHADRTVK LIRDLGCKPG
VVLNPAVTLE SVKHLLDQVD MLLLMSVNPG FGGQKFIPYT LDKLKEARAR LDDAGLEARL
EVDGGVSTAN IADVARAGAD TFVAGSAIFG AQNYESVIKQ MRDTLAQL
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