Gene Sde_0743 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_0743 
Symbol 
ID3966264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp959548 
End bp960369 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content50% 
IMG OID637919805 
ProductSodium:galactoside symporter 
Protein accessionYP_526217 
Protein GI90020390 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones53 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGTTG CCAATCATTT AAATTTAAGG GTATTACCGC GCGGCTTAGT TAGGGTTGTT 
GCCGCATTTA TGTTGTTTGT TGGGCTTGCC GCTGCGGCGA TTGCTGAAAA TCGCGTAACT
AAAGTAGTGC CTATAGAGGC TGTGGAAGCA ATTACCTTAA CCGGTGCTGC AGAGTTAATT
ATTCGGCAGG GTGAAGCTGC GAGTTTGGAA GTGCGCGCAC CCGTGGATGT GCTTGCAAAT
ATTAAGGTGG AGCAAGCTGA TTCGCGACTG ATACTGGGGC AAAAACAAAG CAAATCGTTT
TGGTCGTGGT TTGGCTCTAA AAACGAAAGT AGCGACGTTA CATTTATTGT AACGGTTAAA
AATCTATCGG CCTTAAATGT GGCGGGTGCA GCAAGGGTTC GGCTAGATTC GCTCAACAGC
CCTCAGCTAA TGCTCGAGCT AACTGGCGCC GCCCAAATGC ATATAGGCAA CGCGGTGCTA
GAGCGTTTAC AGGTAAACCT TACCGGAGCG AGCCGTTGTA ATATCGATGC GCTAAGTGCT
CACTTCACTG GTATTCAGTT GGTGGGTGCT TCGCAAATGC AGGTGAATGG TGGCGATACC
GTTGAATTGA ATGTGGAATC TGTGGGGGCG AGTCGATTGC GTGCAGATGC TTTCAAAGCT
GTGACAGCCA AGGTGCACGC GGTGGGGGCT TCGCAGGCAA CGGTATATGC AAGTAAAGCA
TTAACTGCCA ACGCAACGGG CGCGTCTAAT ATTCGCTATG CGGGGGAGCC TGTTAATGTT
CAGGCAGACA CTGCCGGGGC AAGTAAGGTG GGCAGCCTGT AG
 
Protein sequence
MAVANHLNLR VLPRGLVRVV AAFMLFVGLA AAAIAENRVT KVVPIEAVEA ITLTGAAELI 
IRQGEAASLE VRAPVDVLAN IKVEQADSRL ILGQKQSKSF WSWFGSKNES SDVTFIVTVK
NLSALNVAGA ARVRLDSLNS PQLMLELTGA AQMHIGNAVL ERLQVNLTGA SRCNIDALSA
HFTGIQLVGA SQMQVNGGDT VELNVESVGA SRLRADAFKA VTAKVHAVGA SQATVYASKA
LTANATGASN IRYAGEPVNV QADTAGASKV GSL