Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_0719 |
Symbol | rpsU |
ID | 3965279 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 930612 |
End bp | 930827 |
Gene Length | 216 bp |
Protein Length | 71 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637919781 |
Product | 30S ribosomal protein S21 |
Protein accession | YP_526193 |
Protein GI | 90020366 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0828] Ribosomal protein S21 |
TIGRFAM ID | [TIGR00030] ribosomal protein S21 |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.00024481 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTTCAG TTAAACTGAA AGAAAACGAG CCATTTGACG TAGCATTACG TCGTTTTAAG CGTTCATGCG AAAAAGCTGG TGTACTTGCT GAAGTACGTC GTCGTGAATT CTACGAGAAG CCAACTTCTG TTCGTAAGCG TAAAGCAGCT GCTGCTGTTA AGCGTCACGC TAAAAAGGTT CAGCGCGAAA ACCGCAAGTT CCAACGTTTG TACTAG
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Protein sequence | MPSVKLKENE PFDVALRRFK RSCEKAGVLA EVRRREFYEK PTSVRKRKAA AAVKRHAKKV QRENRKFQRL Y
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