Gene Sde_0701 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_0701 
Symbol 
ID3966298 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp907765 
End bp908592 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content44% 
IMG OID637919762 
ProductUDP-glucose 4-epimerase 
Protein accessionYP_526175 
Protein GI90020348 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.399918 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0107681 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATAA AAACATTCTT CCCCGCACTT ATTGCAAGTG TATTTTTATT AATTAACGCC 
AGCACTGGCT ATGCAGCAAG CATTACCAAA ACGCTTTGCA ACCCAGCCGA TTCCGATAAC
GGCTACGGTG CAGGAACCTT CAATGGCAAA TTTTATTCTT GGTTTGAGTT AAGCCAAGAA
GACATTACCG ATTGCGATAC AAAAATTGGT TTTTACAACG AAACCAATCG ACACTTTAGG
GTGGAGTGGA ATGTTGCTCA ATCTTGGGGA GAAGATGCAA TTGGTGGAAT GGGTTGGAGC
TCTGGCTCGA GAGATAGAAA AATAGGTTAC AACGTTGGCC AACTTACAAC TAATTCTTCT
ATTCAAAAAG CATTGGTTGC TATGTATGGC TGGTCTTGCT CTACCAGTGG TGGCAACCAA
ATATCACAAG AATATTATGT AGTGGATACA TGGGACGGCG GCAAGTTTGT GCCTTGGGAT
GAAAACGCAA ATAATGGCAA CGGTGCTCCA GCACAGAGTG TAGGAACAGT TAGCGCTAAT
GGTGCAACAT ACGATGTTTA TAAGGTTCGC CGCAACGGTG CGCAATATTG TTTTAATGGC
AGCAGCCGCT CGTTTGATCA GTTTTGGAGT GTGCGTAGAA CGCCTAGAGC GATTAACGGC
AACCGTAATA TGGATTTTCG CCCGCACGCC AACCGCTGGG ACAACAGTGA CCTAGGTTTT
AAAGTTGACG GGTTAAGCAG CGGTTACCAA ATTTTAGCGG TTGAAATATT TGGTGATGCG
AACCTAAGAC ATAAAGGTGC AGCAGATATT ACTTTATGGC CACGCTAA
 
Protein sequence
MNIKTFFPAL IASVFLLINA STGYAASITK TLCNPADSDN GYGAGTFNGK FYSWFELSQE 
DITDCDTKIG FYNETNRHFR VEWNVAQSWG EDAIGGMGWS SGSRDRKIGY NVGQLTTNSS
IQKALVAMYG WSCSTSGGNQ ISQEYYVVDT WDGGKFVPWD ENANNGNGAP AQSVGTVSAN
GATYDVYKVR RNGAQYCFNG SSRSFDQFWS VRRTPRAING NRNMDFRPHA NRWDNSDLGF
KVDGLSSGYQ ILAVEIFGDA NLRHKGAADI TLWPR