Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_0694 |
Symbol | |
ID | 3964945 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 896963 |
End bp | 897802 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637919755 |
Product | hypothetical protein |
Protein accession | YP_526168 |
Protein GI | 90020341 |
COG category | [S] Function unknown |
COG ID | [COG2764] Uncharacterized protein conserved in bacteria [COG3795] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.0969715 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.00000000507336 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGAAAGTAA TGGTTATGGT AAAAGCATCG GCGAGTTCCG AAGCGGGCAA AATGCCAAGC GAAGCACTAC TTACCGCAAT GGGCGAATTT AATGCTCAGT TGGTAGATGC AGGAGTTATG GAAAGTGGTG AAGGCTTAAA GCCAAGCAGC GAGGGCTACC GCGTACATTT TAATGGCAGC GAACGCACCG TTAGCCAAGG CCCGTTTGCC GCTACCAACG AATTAGTAGC TGGCTTTTGG GTATGGAATG TAAACTCTAT GGAAGAAGCC TTAGAGTGGG TTAAAAAATG CCCCAACCCC ATGGAAGAAG CATCGGATAT AGAGATTCGC GCACTCTACG GTATGGAAGA CTTCGCCGAC GCAGACCCAA GTGGCGAAAT AGCAGCACAG GAAGACGAAC TGCGCCAAAC CTTAGAGATG CAAAAAAGCA GCGTGCGCAA TTATTTGTTT TTTGCTGGCC GCTGCCAAGA AGCACTGGAT TTTTACACCC AGCATTTAGG CGCAAAAGTT GAATTTAAAA TGCACTTCAA CGAAAGCCCC GAACCTATGC CGGCAGATAT GCTACAAAAA GGCTTTGAAA ATAAAATTAT GCACGCAGCG TTTAAAGTTG GCGACGTTAC AATACTGGCC AGCGATGGCT GTAACGACAC AGACACGTTT AGCGGCTTTA GCTTGGCACT TACGGTACCC AACGAACCCC AAGCCCACAG AGTGTTTAAC GCGCTAGCGC AAGATGGCAA GGTAGTTATG CCTTTAGCCA AGGTATTTTG GTCACCGCTG TACGGCCAGG TTACCGATAA ATTTGGCGTA GCCTGGATGA TAATGCTGCC TGATGCCTAA
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Protein sequence | MKVMVMVKAS ASSEAGKMPS EALLTAMGEF NAQLVDAGVM ESGEGLKPSS EGYRVHFNGS ERTVSQGPFA ATNELVAGFW VWNVNSMEEA LEWVKKCPNP MEEASDIEIR ALYGMEDFAD ADPSGEIAAQ EDELRQTLEM QKSSVRNYLF FAGRCQEALD FYTQHLGAKV EFKMHFNESP EPMPADMLQK GFENKIMHAA FKVGDVTILA SDGCNDTDTF SGFSLALTVP NEPQAHRVFN ALAQDGKVVM PLAKVFWSPL YGQVTDKFGV AWMIMLPDA
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