Gene Sde_0690 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_0690 
Symbol 
ID3964941 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp893144 
End bp894007 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content43% 
IMG OID637919751 
Productdihydroneopterin aldolase 
Protein accessionYP_526164 
Protein GI90020337 
COG category[I] Lipid transport and metabolism 
COG ID[COG0575] CDP-diglyceride synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000000502165 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGGCACCAC AGATATTGGC ATTTTATTTG TTGTGTTTAA GTATTGCGGG TTTACTTACC 
TTGTACTGCT TTATTAAACG CAACGCTGGC ATGGTAAAGC GTTGCATCAC CATATTGGTA
TTACTGCATA TTATGGTGGT TATTTTATGG TGTTCACCCT GGGGGGCTTG GCTGTTTACT
TTATTGCTTT GTGGTGTGGC AAGTTTTGAA GTAAGTCGAC ATCAACTAGG GCGGCTGGGA
AGTTGGCTGT TAACGTTTGT TGCCCTAATT CTCGCTGTAA CTATTTTTAA ATTAGCTATA
TCAATTTGGC TTTGGGGCTG GTTGCTTGGT TTAGTGGCAG TATTTATATT GCCCGCACAT
GTACTAGCCT CAAAAACCGC GAGTTTAGTG TTTACTCTTA TGTTTGTAGT GTTGGGTTGT
ACTGCATTAT TGTTTTTAGT GCAGCCTGTG CCGGTGTTGT GGATGCTATT AATATTGATT
GTTCAATTTA ATGATACCCT CGCTCTCTTT ATTGGCAAGG CATTGGGTAA GCATAGGTTG
TTTCCCCATT TAAGCCCAAA TAAAAGTGTA GAAGGCTATG TGGCAGGTGC GTTGGGCGTT
ATTCTGGCCC TTATTGCAGC CTATGGTTTA CTTGGGTTTG AAATGGCGAG CCCTACCGCA
TGGGGTTGGT TGGCGCTTGT TGGCTGGGTG GCCGCTAGCT TGGGCGATTT GGTTTTTTCT
AAATATAAGC GGGCGCAAGG CATTAAAGAT TTTTCTGCTA TGTTGCCAGG GCATGGCGGT
ATTGTGGACC GTTTTGATAG TTTGTTGGTA ACTGCTCCGG CTTTCTTAGG TTTCTATATA
GGATTCCCCT ATGCGTTCTA TTAA
 
Protein sequence
MAPQILAFYL LCLSIAGLLT LYCFIKRNAG MVKRCITILV LLHIMVVILW CSPWGAWLFT 
LLLCGVASFE VSRHQLGRLG SWLLTFVALI LAVTIFKLAI SIWLWGWLLG LVAVFILPAH
VLASKTASLV FTLMFVVLGC TALLFLVQPV PVLWMLLILI VQFNDTLALF IGKALGKHRL
FPHLSPNKSV EGYVAGALGV ILALIAAYGL LGFEMASPTA WGWLALVGWV AASLGDLVFS
KYKRAQGIKD FSAMLPGHGG IVDRFDSLLV TAPAFLGFYI GFPYAFY