| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0688 |
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| Symbol | |
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| ID | 3964939 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 877133 |
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| End bp | 883915 |
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| Gene Length | 6783 bp |
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| Protein Length | 2260 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637919749 |
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| Product | polyketide synthase modules and related proteins-like |
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| Protein accession | YP_526162 |
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| Protein GI | 90020335 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3321] Polyketide synthase modules and related proteins |
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| TIGRFAM ID | [TIGR00128] malonyl CoA-acyl carrier protein transacylase
[TIGR00517] acyl carrier protein
[TIGR01564] S-layer protein, MJ0822 family
[TIGR02813] polyketide-type polyunsaturated fatty acid synthase PfaA |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.00000350416 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTAAAT CCAGCCCTAT TGCCGTTGTT GGTGTGAGTA GTATCTTTCC CGGTAGCCCG
CAAGTATCTG GTTTTTGGCG AGATATTTTG CAAGGCAAAG ATCAAATACG AGAAATACCA
GAAAGCTACT GGTTGATAGA CGATTACTAC GATAAAAACC CCCAAGCGCA AGATAAAACC
TACGGGCGCA GAGGGGCGTT TATCGAGTCG GTAGCATTCG ACTGTATTGA GCACGGTATT
TTACCTTCGC AACTGCAAGA TATAGACACA GTGCAATTGC TTGCACTAGT GGCTGCGCAG
CATGTGTTAC GCGATGCGGC CAAGGGCGAT TATAAGCATT TAGATAAATC TCGCATGAGC
GTTATTTTAG GTGTGGCTGG GGGCACAGAG CAGCTAGTGC AAATGGGCGC GCGATTGCAA
AAACCGGTAT GGCTGAAGTC GCTACGAGAA GCCGGCATAG CAGAAAATTT AGCGCAAGAA
ATTTGTCAGC GCATAGCCGA CCACTACGTA CCTTGGTCGG AAGCTAGCTT TCCTGGTTTA
TTGGGTAACG TTGTGGCTGG ACGAATTGCC AATCGCTTGG ATTTAGGTGG TACCAATTGC
GTGGTGGATG CGGCCTGTGC AAGTTCCTGC TCTGCCTTGG CGATGGCCGT AAACGAATTA
CATCTGGGCC ATTCCGATTT CGTAATAACC GGCGGCGCAG ATGCACTTAA CGATATATTA
ATGTATATGT GCTTTAGTAA AACGCCAGCG CTATCCGCTA CGGGGGATTG TAGGCCATTT
TCAGATGCTG CAGATGGCAC TATTCTTGGC GAAGGTGTAG GCATGCTGGC ACTGCGCAGG
TTAGAAGATG CCGAGCGAGA TGGCGATACT ATTTATGCTG TTATAAAAGG TGTGGGCTCA
AGTTCAGATG GCGCAGGTAC TGCGGTGTAT GCGCCGGTAA GTGAAGGTCA AGCAAAGGCA
ATTAATCGCG CATACACACA AGCAGATTTT TCTGCAAATA CCATTGAGCT AATTGAAGCA
CACGGTACCG GTACCAAGGC TGGAGATAAA GCAGAATTTA ACGGGTTAAA TATTGCTTTT
GGCGCAAGCG AGCAAAGCCA AAGCAATAAT CAGTGGTGTG CGCTTGGCTC GGTAAAAAGC
CAAATAGGCC ACGCAAAAGG TGCCGCCGGT GCAGCGGCTT TAATTAAAGC GGTAATGGCT
CTGCACCATA AAGTACTGCC ACCAACCATT AAAGTGAATC AACCAAACCC CGCCTTTAAT
ATAGAGCAGA CCCCTTTTTA TATAAATACT AAATTGCGGC CCTGGGTGCG CAACAGCCAT
TACCCGCGCC GAGCGGGGGT ATCCTCGTTT GGCTTTGGTG GCAGTAATTT TCACGTAGCG
TTAGAAGAAT ATACAACTGC GCAAGCCAAC CCGCGTTTGC ACATGGTATC CGATACTCAC
CTAGTGCTGG CTGCTGGTGG TAGCCACGAA GAGTTATTCC GTAAACTAAT AAACACAGTA
GACAATTTAC CCAGCGATAA AGATGCGCTG GAGTATTTTG CTAGGCAATC GCAAGAAACC
GTACAAGCAA GCCAGCCTTA CCGCGTAGCA TTTGTTATTG ATAGTGTTGA GCAGCTGCGC
CAGCTTATTG CGCAAGCAAA ACAGCAAACA CAAGCCAATA CCGCTAAAAA TGTTAATTCG
CCCAGTGGTT GGTTTTACGG TGTTTCTCAG GGTGCTACCG CCGGCGAGAG TGAACATGTT
GGCTACGGAA AAATTGCGTG TCTTTTCCCC GGGCAGGGCA GTCAATATGT AGATATGTGT
GCGCCATTGG CAACGGTATT TCCCGCTGCG CGCGAAGTTT GGGATTCCGC CGAGTCGAAT
TTTGCTGAAG GCGAATCGCT ATCTCGTGTT GTATTTCCTA TTTCTACTTT TAGTGAGGCG
GCCGCGCAAA GCCAACGTGA TTGGTTAAAT CAAACAGAGT GGGCACAGCC TGCTATTGGT
GCCGCTAGCT TAAGTGTATG GGCGCTATTA AAAAAACTAG GTTTAAATCC AGAAGCCTTT
GCTGGCCATA GTTATGGCGA ACTTACCGCG TTAAGCGCCG CCGGTGTACT TTGCGAGCAA
AGTTTAATTG CCACTGCGCG CGCGCGTGGG TTGGCGATGC GTGATGCATC TGCTTCTACC
AGTGGGGCAA TGGCTGCGGT GCATGCCAGT GTGAATACCG TTAATGAGTT GTTAGAAAAA
TTATTAAGTG AAGCAAAGCA AGCGGGTAAC GCTAACCCTA TTATTACGCT GGCTAATATT
AACTCGCCGT CGCAGGTTGT TATTAGCGGT GCAACGGAAG TGGTAGACGC CTTTACCGAA
CTGTGCGAAC AAGAAAATAT TCGTGTTAGC AAATTGCCTG TTTCAACTGC ATTTCATTCC
CCGATTGTGG CGCAAGCGGT AGCCTCGCTG GCAGATCACC TAAAAACCAC ACCATTTAAC
CCAATACAAA AAACGGTGTA TGCCAATAAA ACGGCACAAC CGTATCCAAG CGATGTTACG
CAACAGCAGC AATTACTTAC CCAGCAATTA ATATCACCTG TGCGTTTTCA AGAGCAAATC
GAGGCCATGT ACGCACAGGG CTACAGAACA TTTATTGAGG TGGGGCCAGG TAATGTACTT
ACCGGTTTGG TCAGTGCAAT ATTGCAAGGC AAAAATCACG TCGCTATCGC GACCGATAAA
AAAGCAAATA ATTCCTTAGC GACCTTCTGG AAGGCGCTAG GCCAATTAAC CTGCCTAGGG
GTTAAGTTAG ATTTTTCTGC ACTGTGGCAA GATTTCCGCA AACAAACGGC GCCCGCGGAC
CGTGTGAAAC CTAAAATGGC GTTGCCCATA ACGGGCATTA ATTACAATCG TGTATACCCT
CCAAAAAATG GTGCAGCAGG TATTCCTCCA GCAAATCCAG AAGAGCTGCT GGCGCAGTCT
GTCAATGCTC AGTCCACATC TGCTCAGCCC ATAAAAACAG AGCAAGATAA TTTACATTCC
ATTAATAAAA ATGATGGCGT ATTGCTTAAT ACCCCTAACG CGCAGCCCCA TGCCGCTAGC
TCGCTTAAGA GCAACTCGGT GGATACTAGC TCGATGGTTC CTAACCCTAT AGCCGCAATG
CCAACTACCA GTAGCCATCA AGCCCATTTG CAAACAGAGG ATAGTCCCAT TTCTAATTTC
ACCCCTAATC AAAAAAGCGA ATGGCTGGCG GCATTCGAAA ATATACAAAA ACAAACTAAC
GAAACTCATC GTCAGTTTCT GCAAATGAGC GAGCAAGCCT TAGCACAATT AGGGCAGTTA
GTTGCATCAG GTTCGGCTGC GCCAGTAGAT ACTAGTTCAG TTAGCGCTCA GGCAGAGCAC
ACTATAGCCG TTAACAACCT AGACGTTTCT GCACATGCTC AATATCAGCA ACCGCAATCG
GCAATACAAA GCGAGCCAAA CGTAGCGCCC GCAGGCGATG AAATAGTTAA AACAGTGGCG
GAGCCCGCAG CACCTAGCGC CATGCCATTA CCAGTTACGC AAAATCTTGA TGTAGCAGAG
GTTATGCTAA ATGTAGTGGC AGATAAAACC GGCTACCCGA GAGAAATGCT GGCTTTGTCT
ATGTCGTTAG AAAATGATTT GGGTATCGAC TCCATTAAAA GAGTGGAAAT ATTATCTGCA
ACCTTAGACG TTGTGCCAAA CCTGCCAGAA GTAAACCCTT CAGATATGGC GGTACTAAGC
ACACTCGAAG AAGTTGTGCA GTTTATTCAG CGCAAAATGG CAGAAGTGGC GCCAAGCTCC
AACTCAATGG CTACACCACA AAACCAAGTA AGCGCACCGG TTGAAAGCCC GCAAATACCA
AGCCCAGCGC AGAAAGTAGT AGCCGATATA AATGTAAACG ACTTGCTTAT GCAAGTAGTA
GCAGACAAAA CAGGTTACCC GCTAGAGATG CTTAATCTCG ATATGCATTT GGATGCAGAT
TTAGGTATAG ATTCTATTAA ACGGGTAGAA ATTTTATCTG CGGCAACAGA GCAATTAGAT
TCCTTGCCAG AGCTCGATAA CAGCGTAATG GCAGGCCTTA ATACACTGGC AGAAATTTCG
CGATATATCA CTGCGCAGCT AAGTGCAGCC AGTGGCGTTG CAAGTGAGGC AATAGCACAG
CCTGCTACGC ATGAAGTTTC TACCCCCTCG ATCACATCCA GCGACAACAC TGTAGATATT
CAGCACATAA TGTTAAGCGT TGTGGCAGAA AAAACGGGCT ACCCGGTAGA TATGCTAGAG
CCAAGCATGG ATTTAGAAAA CGACTTAGGC ATAGATTCTA TCAAACGCGT AGAAATACTT
TCTGCGACCC TTGAGAAGGT ACCTAATTTG CCAGAGTTCG ATGCCGCGAG TATGAGTAGT
CTAAACACTC TTGCTGAGAT AATTGAATTT ATAAAAAAGC AATTAGGCAG TACTAAGGAT
GAAACTAATC CAAGTGCTGC CGTAGTCGAA AAAGAATTAC AGGCTGCCGC AACTAACAAT
AATTTATTAA GTCGTTACGA ATTAGAGCTG CTGCAGCTAC CAAGGCCAAA TTTTATGCCG
CATCAATTGA TGCAGCCACT AGTCATTGTG CCTGCTAATT CCCCCTGCGC TCAGCCACTA
TGCGACGCGC TAAAGGCGCG CGGTTTGCAG GCCGAGGTTG CTCAGCGAGT AAATGAAAAC
CACAAGGCCG TAATTAGTTT AAATGGTTTG CAAAAATTTA AACACAGTAA AGATGCACTA
GCGATTAACC GCGTTATTTT TGAGCAAGCC TGCACATTGG CTCCAGTGCT AGAAAAAGAA
GTCGGAGTAT TTATTGCTGT ACAGAACACT TCGGGCGACT ATGGCCAAAG CGGTGCCTCA
GGCGTGCAGA GTTGGTCTGG TGGTATCAGT GGCCTAGTTA AAACAGCTGC GCAAGAATGG
CCCGCTGCGT TAGTAAGAAG TATTGACATT AATATAGAAA AAATCACGCT TGCTGAGCTT
GTTAATAATC TTGCACAAGA AATTGTCGAT GGCGGTATTC AGCGCGAAGT AGCGTTAGGC
TTGTATGGTA AGCGTTGTGT GCCTGTTAGC GTAAAAGCCA GTGTGCAACA AGGCAGCATG
CCACTACATA AAGACGATGT GATATTAGTT ACTGGCGGTG CGCGGGGCGT CACAGCGGAA
GCCATATTAG CTTTAAGTAA ACAATTACCT TTAAAGTTTG CATTGCTAGG CCGCTCGCCG
GTAATTGATG TAAGCCGGTT TGAGCATTGT GCGGATGAAG CCGCAATAAT GCGAGCAATT
CTAGCCGAAG CAAAGGCGGC AGGAATTCAA ATGCTCCCTG CAGAATTAAA GCGAGAAGTG
GGGCTTGTGG TTTCTTCTAG GGAAGTAAGC AAAACGTTAA GCAATCTACA GGCAGCTGGC
TCACAGGTAA GTTATTTCCC GTGTGATATA AACAATCAAG ACCAACTAGC CGAAGTGGTA
AAACAAATTC AAACGCAGTT GGGGCCCATT AGTGGGGTTG TTCACGGAGC GGGTGTATTG
GCCGATAAAT TATTATCTGG CAAAAAAATT GAGCACTTTG ATGCGGTGTT TGGTACCAAA
GTGCAGGGGC TGCATAACTT ACTCAATGTA CTAACGGATC AAACATTAAA AGTGCTTTGT
TTGTTTTCTT CGGTTGCTGC GCGAGCGGGC AATATTGGTC AGAGTGATTA CGCAATGGCT
AATGAAGTAC TTAATCGTGT GGCCGCTTGG TATAGCGCAG CAAATAACAC TAAAGTAGTG
GCTATTAACT GGGGGCCGTG GGAAAGCGGT ATGGTAACGG ATGCGCTCAA ACAGAAGTTT
GCGCAAATGG GGGTTGAGCT AATTCCCTTG CACAGCGGTG CACAATTTTT TGTAGATGAG
CTACAACACA GCCAAATTAA TACCGAGGTC GTTTACGGTG GCATGCCTCT TAATAAACCG
TTGGCCAACC CAGGTGCTTT GTGTAGCCAT AAAATGCAGG TGGTGGCGAG TTTACAATCT
CTGCCCCATT TAGAAAGCCA CAAGGTTCGC GGTGAAATAG TACTCCCTGT AGTACAGGTG
GTAGATTGGT TTAGGTCTGC CATGCTATCT GTGCTGCCAA GTTTAAAGGC GTTTACACTG
TTAGATTTAA AAGTGCTAAA AGGCATTGTA CTTAGCGAGC CTCACGTTAC TTTTACAATC
AACTTGGAAG AACTGCCCAA CTCAACGCTC TTTTCGCTTG GTCTTACCGA TGCCAATGGT
GTACTGCGCT ATAGCGCAAA CGTTAACTGT TTAGATAAAA GTTATACCGA AGCGAGTGGT
GCCGGTGTGG GCGAATCCGG GGAGGCGCCG TCTCGTGGCT TACTTAGCAA GCCAAGCAAC
CCCAGCTATA CGCATTTTAA CCCCTATAAA GAATTGTTGT TTCACGGTGA ACACTACCAG
TCGATTACGC GAATTGGCGC TTTAGAAGAT GATAGTGCCG TGGCCGAATT AATAGGTACA
AATCAATTAA ATTGGGCTGA CTATGGTGCA AGTATAGATC AAGCTATATT GGATGGCGCT
TTGCAACTTG CATTGGTTTG GGGGCAAAAG CATATCAATC GCGAAAGCCT GCCAATGGGG
TTCGACACTA TGCAAATAAA TCACTTTGGT ACAGTACAGG GCGCAGTGCG CTGTTATTTA
CAGCGTGAAA AACACGATAG TGTGAGCACG GTTTCCAATA TTTGGTTATT AGATTCCGCC
GATACAGTAC TTGCTTGCAT ACGCGGTTTG CGTATGTACG CTGTTAACGA AAGCTTGCGG
TAA
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| Protein sequence | MSKSSPIAVV GVSSIFPGSP QVSGFWRDIL QGKDQIREIP ESYWLIDDYY DKNPQAQDKT
YGRRGAFIES VAFDCIEHGI LPSQLQDIDT VQLLALVAAQ HVLRDAAKGD YKHLDKSRMS
VILGVAGGTE QLVQMGARLQ KPVWLKSLRE AGIAENLAQE ICQRIADHYV PWSEASFPGL
LGNVVAGRIA NRLDLGGTNC VVDAACASSC SALAMAVNEL HLGHSDFVIT GGADALNDIL
MYMCFSKTPA LSATGDCRPF SDAADGTILG EGVGMLALRR LEDAERDGDT IYAVIKGVGS
SSDGAGTAVY APVSEGQAKA INRAYTQADF SANTIELIEA HGTGTKAGDK AEFNGLNIAF
GASEQSQSNN QWCALGSVKS QIGHAKGAAG AAALIKAVMA LHHKVLPPTI KVNQPNPAFN
IEQTPFYINT KLRPWVRNSH YPRRAGVSSF GFGGSNFHVA LEEYTTAQAN PRLHMVSDTH
LVLAAGGSHE ELFRKLINTV DNLPSDKDAL EYFARQSQET VQASQPYRVA FVIDSVEQLR
QLIAQAKQQT QANTAKNVNS PSGWFYGVSQ GATAGESEHV GYGKIACLFP GQGSQYVDMC
APLATVFPAA REVWDSAESN FAEGESLSRV VFPISTFSEA AAQSQRDWLN QTEWAQPAIG
AASLSVWALL KKLGLNPEAF AGHSYGELTA LSAAGVLCEQ SLIATARARG LAMRDASAST
SGAMAAVHAS VNTVNELLEK LLSEAKQAGN ANPIITLANI NSPSQVVISG ATEVVDAFTE
LCEQENIRVS KLPVSTAFHS PIVAQAVASL ADHLKTTPFN PIQKTVYANK TAQPYPSDVT
QQQQLLTQQL ISPVRFQEQI EAMYAQGYRT FIEVGPGNVL TGLVSAILQG KNHVAIATDK
KANNSLATFW KALGQLTCLG VKLDFSALWQ DFRKQTAPAD RVKPKMALPI TGINYNRVYP
PKNGAAGIPP ANPEELLAQS VNAQSTSAQP IKTEQDNLHS INKNDGVLLN TPNAQPHAAS
SLKSNSVDTS SMVPNPIAAM PTTSSHQAHL QTEDSPISNF TPNQKSEWLA AFENIQKQTN
ETHRQFLQMS EQALAQLGQL VASGSAAPVD TSSVSAQAEH TIAVNNLDVS AHAQYQQPQS
AIQSEPNVAP AGDEIVKTVA EPAAPSAMPL PVTQNLDVAE VMLNVVADKT GYPREMLALS
MSLENDLGID SIKRVEILSA TLDVVPNLPE VNPSDMAVLS TLEEVVQFIQ RKMAEVAPSS
NSMATPQNQV SAPVESPQIP SPAQKVVADI NVNDLLMQVV ADKTGYPLEM LNLDMHLDAD
LGIDSIKRVE ILSAATEQLD SLPELDNSVM AGLNTLAEIS RYITAQLSAA SGVASEAIAQ
PATHEVSTPS ITSSDNTVDI QHIMLSVVAE KTGYPVDMLE PSMDLENDLG IDSIKRVEIL
SATLEKVPNL PEFDAASMSS LNTLAEIIEF IKKQLGSTKD ETNPSAAVVE KELQAAATNN
NLLSRYELEL LQLPRPNFMP HQLMQPLVIV PANSPCAQPL CDALKARGLQ AEVAQRVNEN
HKAVISLNGL QKFKHSKDAL AINRVIFEQA CTLAPVLEKE VGVFIAVQNT SGDYGQSGAS
GVQSWSGGIS GLVKTAAQEW PAALVRSIDI NIEKITLAEL VNNLAQEIVD GGIQREVALG
LYGKRCVPVS VKASVQQGSM PLHKDDVILV TGGARGVTAE AILALSKQLP LKFALLGRSP
VIDVSRFEHC ADEAAIMRAI LAEAKAAGIQ MLPAELKREV GLVVSSREVS KTLSNLQAAG
SQVSYFPCDI NNQDQLAEVV KQIQTQLGPI SGVVHGAGVL ADKLLSGKKI EHFDAVFGTK
VQGLHNLLNV LTDQTLKVLC LFSSVAARAG NIGQSDYAMA NEVLNRVAAW YSAANNTKVV
AINWGPWESG MVTDALKQKF AQMGVELIPL HSGAQFFVDE LQHSQINTEV VYGGMPLNKP
LANPGALCSH KMQVVASLQS LPHLESHKVR GEIVLPVVQV VDWFRSAMLS VLPSLKAFTL
LDLKVLKGIV LSEPHVTFTI NLEELPNSTL FSLGLTDANG VLRYSANVNC LDKSYTEASG
AGVGESGEAP SRGLLSKPSN PSYTHFNPYK ELLFHGEHYQ SITRIGALED DSAVAELIGT
NQLNWADYGA SIDQAILDGA LQLALVWGQK HINRESLPMG FDTMQINHFG TVQGAVRCYL
QREKHDSVST VSNIWLLDSA DTVLACIRGL RMYAVNESLR
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