| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0665 |
|---|
| Symbol | |
|---|
| ID | 3967639 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | - |
|---|
| Start bp | 846183 |
|---|
| End bp | 846650 |
|---|
| Gene Length | 468 bp |
|---|
| Protein Length | 155 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637919726 |
|---|
| Product | ferritin and Dps |
|---|
| Protein accession | YP_526139 |
|---|
| Protein GI | 90020312 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0783] DNA-binding ferritin-like protein (oxidative damage protectant) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.00368678 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACAATTA ATATTGGTAT AAGCGAGTCA AACAGAAAGG ACATTGTACA GGCGCTATCT
CACCTGCTAG CCGACAGCTA CGTACTGTAC TTAAAAACCC ATAACTTCCA CTGGAACGTA
ACCGGCCCTA TGTTTCAAAC ATTACACAAC ATGTTTATGG ATCAGTACAC AGAAGCTTGG
ACAGCGCTAG ACACCATTGC TGAGCGCATA CGTACACTTG GCTTCCCTGC ACCGGGGTCG
TACAAGCAAT TTATGGCCCT CACCTCTTTA AAGGAAGAGG AAGGAGTACC AAGTGCCGAA
GATATGGTGC AACAATTGCT AGAAGGTCAA GAAACACTGG TGCGTATTGC GCGCGAGGGC
ATGAAAATAG CGGAAGCAGC AGATGATCAA TCTTCTGCAG ATTTATTTAC ACAACGCATC
GAAGTGCATG AAAAAAATGC CTGGATGCTG CGCTCTCTAA AAGGGTAA
|
|---|
| Protein sequence | MTINIGISES NRKDIVQALS HLLADSYVLY LKTHNFHWNV TGPMFQTLHN MFMDQYTEAW
TALDTIAERI RTLGFPAPGS YKQFMALTSL KEEEGVPSAE DMVQQLLEGQ ETLVRIAREG
MKIAEAADDQ SSADLFTQRI EVHEKNAWML RSLKG
|
|---|
| |