Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_0652 |
Symbol | |
ID | 3964981 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 825854 |
End bp | 827563 |
Gene Length | 1710 bp |
Protein Length | 569 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637919713 |
Product | Beta-glucanase/Beta-glucan synthetase-like |
Protein accession | YP_526126 |
Protein GI | 90020299 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2273] Beta-glucanase/Beta-glucan synthetase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.307266 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATAAAAA CATGCAAAAC CACACCAGCC AAGTGGGCAG CAGCCCTTAG CTTAGGCTGC GCCCTACTTT TACCCTCAGG CGTCAATGCT GCCACCTTCC AAGCAGAAGA TTACAGCGCC TTCTACGACA CCACCGCGGG TAACACTGGC GGCGCCTACC GCAATGATAA CGTCGATATA GAAGCCACCA ATGATAACGG CGGCGGCTAT AACGTGGGCT GGATAGATGC CAACGAATGG CTGGTATACC CAGGCGTAAA TATCACCACC ACCGGCGACT ATGTAATTAA TGTACGCGTG GCGAGCGCAA GCGGCGGTGC ACTTTCTGTC GACTTTAATG CAGGCTCTAT TCCACTGGGT CAGTTCGATA TTCCCAACAC TGGCGGTTGG CAAAACTGGG TAACCGTTTC AAAAACAGTT ACTTTAACTG CCGGCACCTA CGATATGGGC GTATTCGCCT CTACCGGCGG CTGGAACTTT AACTGGATAG AAGTCACACC CGTTAATAAC GGTGGTGGCA ATGGCGGCGG TTCAGCCACG TTCTTTCAAG CGGAAGACTA CAGCAACTAC TCCGACACCA CACCCGAAAA CATTGGCGGC GCCTATCGCA ATGACGGTGT AGATATAGAA ACCACAAGCG ATGCCAACGG CGGCCACAAT ATAGGCTGGA TGGAAAACGG CGAATGGCTT GCCTACGAAG GTTTATCTAT TCCCAGTAAC GGCAACTACA TCATTAAAGC GCGTGTAGCT AGCCCCAACG GCGGCGCACT ATCGTTTGAT TTAAACGGCG GCGGCCAAGT GCTTGGCACA ATGAACATAC CCGCTACTGG CGGTTGGCAA AATTGGCAAA CCGTAGAATT GAGCACCAAC ATTAATGCCG GAACCTATAC GCTCGGCGCC TTTGTTAGTA CTAGTGGCTT TAACCTAAAT TGGATAGAAG TCGTTGCCGG TGGCGACGGC GGCAATAATG GTGGCGGTGG TGGCAACATC ACTTGGCGCG ATGAATTCGA CACAATCAAC CGCGATGTTT GGAATTTTGA AACCGGTGGC GGCGGCTGGG GTAACAACGA ATTGCAATAC TACACCGACG GCCAAAACGC TTCCATTCAG TTCGACCCGC AAGCCGGTAG TAATGTGTTA GTTATCGAAG CCCGCAAAGA AACCGGTGGC CAATGTTGGT GGGGCGGCAA TTGCGGTTAC ACCTCTAGCC GCATGAACAC GCGGTTTAAA AAATCGTTCC AATACGGCCG TATAGAAGCA CGTATGAAGC TGCCGCGTAC CCAAGGTATT TGGCCAGCGT TTTGGATGCT AGGTGACAAC TTTAATAATG TAGGCTGGCC TCAAGGTGGC GAACTAGACA TTATGGAGCA CGTAGGCACC AACAATATCA CATCGGGTGC ATTGCACGGC CCAGGCTACA GCGGTAATAC GCCCATTACC GGCCATTTGG AGCACGGTGC AAGCATTGAT TCTGGCTACC GTGTTTACGC AGTAGAATGG GATACCAATG GTATTCGCTG GTTTGTTGAC GGCACCAACT TCTACAGCGT AGAAAAATGG CAAGTGCAAC AGTACGGCGA ATGGGTTTAC GACCAACCTT TCTGGATACT GCTAAACCTA GCGGTGGGAG GCAACTGGCC CGGCGACCCA GACCACGCCA ACTTTACTAC CCAACGTTTT TACATTGACT ATGTGCGGGT GATTCAGTAA
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Protein sequence | MIKTCKTTPA KWAAALSLGC ALLLPSGVNA ATFQAEDYSA FYDTTAGNTG GAYRNDNVDI EATNDNGGGY NVGWIDANEW LVYPGVNITT TGDYVINVRV ASASGGALSV DFNAGSIPLG QFDIPNTGGW QNWVTVSKTV TLTAGTYDMG VFASTGGWNF NWIEVTPVNN GGGNGGGSAT FFQAEDYSNY SDTTPENIGG AYRNDGVDIE TTSDANGGHN IGWMENGEWL AYEGLSIPSN GNYIIKARVA SPNGGALSFD LNGGGQVLGT MNIPATGGWQ NWQTVELSTN INAGTYTLGA FVSTSGFNLN WIEVVAGGDG GNNGGGGGNI TWRDEFDTIN RDVWNFETGG GGWGNNELQY YTDGQNASIQ FDPQAGSNVL VIEARKETGG QCWWGGNCGY TSSRMNTRFK KSFQYGRIEA RMKLPRTQGI WPAFWMLGDN FNNVGWPQGG ELDIMEHVGT NNITSGALHG PGYSGNTPIT GHLEHGASID SGYRVYAVEW DTNGIRWFVD GTNFYSVEKW QVQQYGEWVY DQPFWILLNL AVGGNWPGDP DHANFTTQRF YIDYVRVIQ
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