| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0651 |
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| Symbol | |
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| ID | 3964980 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 823620 |
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| End bp | 825638 |
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| Gene Length | 2019 bp |
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| Protein Length | 672 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637919712 |
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| Product | OPT family oligopeptide transporter |
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| Protein accession | YP_526125 |
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| Protein GI | 90020298 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1297] Predicted membrane protein |
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| TIGRFAM ID | [TIGR00728] oligopeptide transporters, OPT superfamily
[TIGR00733] putative oligopeptide transporter, OPT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTTGC CACCACCTCT AGTTCCCGCT CACCGCGATT TACCAGAAAT AACCATTAAA
GCACTTGTGC TTGGCATTGT ATTAGCCATG CTGCTAGGCG CTGCGAACGC GTATATTGGT
TTATTGGTTG GGTTAACCGT CTCTGCATCT ATCCCTGCCG CTGCAGCCTC CATGGGGCTA
TTGCGACTCT TCAAGCGCTC GAACATTTTA GAAAACAACA TGGTGCAAAC AGCCGCATCC
GCGGGCGAAT CCCTTGTGGC CGGTATGATA TTTACCGTAC CCGCACTTAT ATTGATGCAG
GCATGGGATA CCTATCAATA TTGGCCGTGC GTAACTATCG CGATTATCGG CGGTATATTA
GGTGTGGCAT TCACCGTGCC GTTGCGCCGC GCACTCATAA TAGAAGCACA ATTAAAATTC
CCCGAAGGCG TAGTTACCGC AGAGGTATTA AAAACCGGCG GCGTAGAGAC AGACAAAAGC
CAAGCGGCCA CAAACACCAA CCCCGCACGT GAAAAAGATT TTAAAAACCT ATTACAAGCT
GCAGGTATTA GCGGCCTGTT TAAATTATTC GAATCTGGCT TTGGTTTACT GGCCGGTAGT
GTGGCTACCA CCAAAGCGTG GTTTGCTGGC AGTTTTTTAT TTACGGGTAG TTTCGCACTT
AGCCCAGCGC TAGTGGGCGT GGGTTATGTA GTAGGCTTAA ATATTGCGCT GCTTATATTT
TTAGGTGGCG CGATTGGAAC CTTAATAGGC GTGCCGCTAA ATTGGTGGCT AAACAGCAAC
GAATTAATGG GCCTAAGCGG TATAGCTGCA CATACCCCTA CCAGTGAATT TAGCCAAACA
GATTGGAACA ATATTGCAAG CCAAGCGTGG AGCCAAAACC GTCGCATTGG CGTTGGCGCT
ATGCTGGTAG GCGGCATTTG GTCACTCATT GCTTTAGCTA AGCCCCTTAT TGCCGGGGTG
AAATCCAGTA TTGCGGCTTA TAAAACGGCA AGCGCTGCCG GCAGCAATGA GGTATTACGC
ACCGAACACG ACACCCCAAT CCACTATGTG TTATGGGTTG CGCTGGCAGC AACTATTCCC
TTATTTCTAG TGTTTTATAA CGCACTCGCG GGCTACAACA GCGCAGCACT AATAGCGGCA
GTTATGACCA TGCTCATGCT GTTTTTTGGC TTTATTTTCG CATCTGTTGC TGGTTACATG
GCCGGCTTAA TAGGCAATTC AAACAACCCT GTTTCGGGAG TAACAATTGC CACCGTAGTG
GTATCTGCTT TTATTTTATT ACAGCTAATG GGTAACCAAG GCCTTGCGGG CCAGCTTGGG
CCTATTGCCG TTATTTATTT AGCGGCGTTG GTTTGCACTG GCGCAGCCAT AGCTGGCGAT
AATTTACAGG ATTTAAAATG TGGCCACATT GTTGGCGCAA CACCTTGGCG GCAGCAACTT
TTCCAAGTAA TTGGTGTAGC TTCGGCCGCA CTTATTATTC CACTTATTTT GCAAATATTA
GATGCAGGCT ATGGCATTGG CCGCCCTGCC GAAAACAATC CCACAGGCAG TTATTTGTCT
GCACCACAAG CCAGCTTAAT GAAAGACCTT GCCAGCAGTA TGTTTGGCGC AGGTTTACAG
TGGACCTTCA TATACATTGG TTTTGCCCTC GCAGTTGTAC TTATTGTTTT AGATGAAATT
CAAAAGCGAC GTGGCTCGAA CTTTCGTATT CCCGTACTGG CTGTAGCGGT AGGCATTTAT
TTACCCCTTG GATTATCTGT ACCCATTTTT ATTGGCGGCC TTATTGCGCA CAGACTTAAA
AATAAAAACA AACTAATAGA CAAAAGCACA CAGCAACAAC GCGAAAACAG CAGTTTAATT
GTTGCCTCTG GTTTAATAAC TGGCGAAGCG TTAATGGGCG TTGCGATTGC GATAGTCGCG
GCATTTATAA TGCCGTTAGC ACACACAGCA AGCTTTGCTT GGGCAACAGG GTTATTGGCT
TTGGCAGGCG TTGTTTATTA TCAAGCAAGG AAGGGATAG
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| Protein sequence | MSLPPPLVPA HRDLPEITIK ALVLGIVLAM LLGAANAYIG LLVGLTVSAS IPAAAASMGL
LRLFKRSNIL ENNMVQTAAS AGESLVAGMI FTVPALILMQ AWDTYQYWPC VTIAIIGGIL
GVAFTVPLRR ALIIEAQLKF PEGVVTAEVL KTGGVETDKS QAATNTNPAR EKDFKNLLQA
AGISGLFKLF ESGFGLLAGS VATTKAWFAG SFLFTGSFAL SPALVGVGYV VGLNIALLIF
LGGAIGTLIG VPLNWWLNSN ELMGLSGIAA HTPTSEFSQT DWNNIASQAW SQNRRIGVGA
MLVGGIWSLI ALAKPLIAGV KSSIAAYKTA SAAGSNEVLR TEHDTPIHYV LWVALAATIP
LFLVFYNALA GYNSAALIAA VMTMLMLFFG FIFASVAGYM AGLIGNSNNP VSGVTIATVV
VSAFILLQLM GNQGLAGQLG PIAVIYLAAL VCTGAAIAGD NLQDLKCGHI VGATPWRQQL
FQVIGVASAA LIIPLILQIL DAGYGIGRPA ENNPTGSYLS APQASLMKDL ASSMFGAGLQ
WTFIYIGFAL AVVLIVLDEI QKRRGSNFRI PVLAVAVGIY LPLGLSVPIF IGGLIAHRLK
NKNKLIDKST QQQRENSSLI VASGLITGEA LMGVAIAIVA AFIMPLAHTA SFAWATGLLA
LAGVVYYQAR KG
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