| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0647 |
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| Symbol | |
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| ID | 3964976 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 816509 |
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| End bp | 817903 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637919708 |
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| Product | ATP-dependent RNA helicase DbpA |
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| Protein accession | YP_526121 |
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| Protein GI | 90020294 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTCTGATT CATCCAATAC CGCCTTTTCT TCTATTGGCC TGCAGCCAGG TTTAATGCAA
AACCTAGAAT CGCTTGGCTA TAACACCATG ACGCCCATTC AAGCCCAAAG TTTACCGAAT
ATTATTGCCG GTAAAGATGT GATAGGGCAG GGTAAAACTG GGTCGGGCAA AACGGCGGCA
TTTGGGTTAG GGCTGCTGAA TAGTTTGGAT GTAAAGCGCT TCTACGTGCA GAGCCTTGTG
CTGTGCCCAA CCCGAGAGCT AGCCGATCAG GTAGCGAAAG AAATCCGACG GCTTGCTCGC
GCCATTCACA ATATCAAAGT GCTCACTTTG TGCGGAGGTA TGCCCTTTGG CCCGCAAATA
GGTTCGCTGG AGCACGGTGC CCATATAGTA GTGGGTACCC CTGGCCGTGT AGAAGAGCAT
GTACGTAAAA ATAATTTAGA CCTAAGCAAG CTTTCTGTAT TGGTGCTGGA TGAAGCAGAC
CGCATGCTAG AAATGGGGTT TCAGGCAGCG CTAGATGCCA TTATAGAAAC CATGCCTAAG
CAGCGCCAAA CACTGCTTTT TAGCGCAACG TTTCCTGAAG AGATACAAGC CATAGCCAGT
CGCATAATGA CGGCACCAGT AATGACGCAA GTTGAATCTA CGCACGATAC CAGCACGATT
AAGCAGCGCT TTTACAAAGT TGATAACGAC GATCAACGTC TATTGGCGGT GCGCTTACTT
CTACTGCAAC ACAAACCTGA ATCTGCCGTA GTGTTTTGCA ACACCAAGCG CGAAACACAA
ATGGTGGCCG ATGATTTAGC TGGTCATGGT TTTACTGCGT TGGCATTACA TGGTGATTTG
GAGCAGCGCG ATAGAGATTT AACCCTAGTG CGGTTTGCCA ATGGCAGTGC CACCGTGTTG
GTAGCCACCG ATGTAGCGGC ACGCGGGTTA GATATTGAAT CGTTAGATGC TGTTATTAAT
TATCACATAG CGCGCGATAT GGAAGTGCAC GTACACCGTA TTGGTCGCAC CGGCCGTGCG
GGCGCAAAAG GTATTGCGTG CTCTATTTAT AGCGAAAAAG AACATTTTAA ATTAGCGCGG
TTAGAAGAAA CCATGGGGCA GCAAGTGGTT AACGATAAGT TACCGCCAAC AAGCGTGCTG
GATTACCCTG CACCCAAACC CAAAATGGCC ACGCTGCAAA TTGATGGTGG TAAAAAGCAA
AAAGTACGGC CTGGGGATAT TGTCGGCGGG CTTACCGGTG AGAACGGTAT TGCAGGTACA
GAAATAGGTA AGATTAGTGT TTTTGATAAT TCGTCTTACG TGGCGGTTGC TTTGCCAGTA
ATGAAAACTG CTTTAAATAA AATTCGCGAT GGAAAATTAA AAGGCCGCAA TTTTCGAGTG
CGCGCCATTA CTTAA
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| Protein sequence | MSDSSNTAFS SIGLQPGLMQ NLESLGYNTM TPIQAQSLPN IIAGKDVIGQ GKTGSGKTAA
FGLGLLNSLD VKRFYVQSLV LCPTRELADQ VAKEIRRLAR AIHNIKVLTL CGGMPFGPQI
GSLEHGAHIV VGTPGRVEEH VRKNNLDLSK LSVLVLDEAD RMLEMGFQAA LDAIIETMPK
QRQTLLFSAT FPEEIQAIAS RIMTAPVMTQ VESTHDTSTI KQRFYKVDND DQRLLAVRLL
LLQHKPESAV VFCNTKRETQ MVADDLAGHG FTALALHGDL EQRDRDLTLV RFANGSATVL
VATDVAARGL DIESLDAVIN YHIARDMEVH VHRIGRTGRA GAKGIACSIY SEKEHFKLAR
LEETMGQQVV NDKLPPTSVL DYPAPKPKMA TLQIDGGKKQ KVRPGDIVGG LTGENGIAGT
EIGKISVFDN SSYVAVALPV MKTALNKIRD GKLKGRNFRV RAIT
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