Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_0644 |
Symbol | |
ID | 3964973 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 812898 |
End bp | 814691 |
Gene Length | 1794 bp |
Protein Length | 597 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637919705 |
Product | hypothetical protein |
Protein accession | YP_526118 |
Protein GI | 90020291 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAACT TATTTTTACT CTCAACGTTT ACTCTCCTTA TTTGTACTTT ACCCACTGCA CACGCACATC GAGGCTTTGA TTCCTATCAA CCTCAAATAG CATGGAGTGA TTGCTACCCA GAACTCTCTT TTTTAGGTGA CTATCAATGC GGTGAAGTGC TTGCACCACT CAACTACAGA CGATATTACG GAGGTGAACC TTCCTCGGAC AACCAAATAT CTTTAAAATT TGTACGTATT CCAGCGCAAA ACCCTGAAGC CCAAAAAGGC ACACTATTTT TTAACTACGG TGGCCCTGGT GGACCGGCAA TACAAAATAC TATTTATCTT GGCAGTCAAA TGCTCACCCA AGAAGTTAGA GATCAATACG ACCTCGTAGG ATTTGACCCA CGTGGCATAG GTGAAAGCAC CCCATTGAAA TGCTTCACTC AATACGAAGA GTTTATGCCT TACTTAAGTA CACCAAGCTA CCCAAGAACT GCAATTGAAG AGCTTGATAA AATTGATCTC TCTGACGTTA TTGCTAACGC CTGTGAAGCC CGAGGCGGAG AACTATATAA AAACATGACA ACGGCGGATG TGGCGCGTGA TTTAGATTGG CTACGCCGCG CATTCGGTGA CGATGAACTT AACTTTTACG GCATGTCGTA CGGTTCGTAT GTAGGCGCAA CCTACGCCAA TATGTACCCT CGCAATGTAG GACGTATTAT TGTTGATGGC GTAATCGATC CTGTCGCGTG GGCCACAGGC CGCGGCTTTC AGAGTTGGTT TGAGCCAGTT ACATCGCGTA TCCGCAGCGA TAAAAGCTCT GCCGACAGTC TGAACGAGTT CTATCGCCTT TGCAGCTTAG CGAACGACAA TTGCGCAATA AGCGAAGCAC CTGAGCAAGC GATGGCGACG GCAATTATTT TAACAGAAGA CTACAGTGTT CCCGTTACCG ATATATACGG CAACACATTT ATATTAACAG AACAAATTCT CGTGCAAGAA ACAATCAGCG CCATGTACTC GCCGACAGCA TGGGAAAGCT TCGCTAATTT AATTGGTCAA CTTGTAGCGC TTTATAATTT TCTTGAAAGC CAACCTACGC CATTGAATTC CGAAACACAG CTATCCAATG TAAATACTGC TTACAATTAT TACAAAGTAG AACTCTACGG CGAAGACTCA GACCTCGAAG AATTCCAGGA TTACTCAGAA GATGAGACGA TATTAACGAG TATTGAATGG TTTCCGAATG TGATGTGCTC TGATAGTAAT AACCCCTACA GCCCATATAG CTGGATAGAC TCAAGCTACA GAGCAGAACA AAAACACGGT TTAGCCGGAG CCTATTGGAA TTGGAGTTCC GCTCCCTGTG CGCATATTAA GCCTTCGCGC TCGCGTTATG CTGGGCCATT TAGGCACTGG ACCAAGAACC CCATTTTAAT TATTAACACA TACTTCGACC CTGCAACCGC CTTAGAAGGC GCAATTGCAC TTAATCGATT AATGCCAAAT TCTCACTTGC TACCCGTAGA AGGCTGGGGA CATGTGTCGT TTCTATCTTC GCAATGCGCA GATGAAGCGA GTTCGGAGTT TCTTATAAAT GGCAAATTGC CAGAGCACGG AACAGTGTGC GAACCATCGA TAGCGCCATT TAATTTAAGT TTAGATATAG CTACGGCTGA TATAAAAGCA CCTGCGAATA TAGAACGCCA ACGCAAACAC TGGGTTAATA GCGTCCATTC AAATCACCAC AAGCTGCACG CTCGTAAACG CCTAAATAGA TTGCTCCGCA ATATCAAGCA GTAA
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Protein sequence | MKNLFLLSTF TLLICTLPTA HAHRGFDSYQ PQIAWSDCYP ELSFLGDYQC GEVLAPLNYR RYYGGEPSSD NQISLKFVRI PAQNPEAQKG TLFFNYGGPG GPAIQNTIYL GSQMLTQEVR DQYDLVGFDP RGIGESTPLK CFTQYEEFMP YLSTPSYPRT AIEELDKIDL SDVIANACEA RGGELYKNMT TADVARDLDW LRRAFGDDEL NFYGMSYGSY VGATYANMYP RNVGRIIVDG VIDPVAWATG RGFQSWFEPV TSRIRSDKSS ADSLNEFYRL CSLANDNCAI SEAPEQAMAT AIILTEDYSV PVTDIYGNTF ILTEQILVQE TISAMYSPTA WESFANLIGQ LVALYNFLES QPTPLNSETQ LSNVNTAYNY YKVELYGEDS DLEEFQDYSE DETILTSIEW FPNVMCSDSN NPYSPYSWID SSYRAEQKHG LAGAYWNWSS APCAHIKPSR SRYAGPFRHW TKNPILIINT YFDPATALEG AIALNRLMPN SHLLPVEGWG HVSFLSSQCA DEASSEFLIN GKLPEHGTVC EPSIAPFNLS LDIATADIKA PANIERQRKH WVNSVHSNHH KLHARKRLNR LLRNIKQ
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