Gene Sde_0644 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_0644 
Symbol 
ID3964973 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp812898 
End bp814691 
Gene Length1794 bp 
Protein Length597 aa 
Translation table11 
GC content45% 
IMG OID637919705 
Producthypothetical protein 
Protein accessionYP_526118 
Protein GI90020291 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAACT TATTTTTACT CTCAACGTTT ACTCTCCTTA TTTGTACTTT ACCCACTGCA 
CACGCACATC GAGGCTTTGA TTCCTATCAA CCTCAAATAG CATGGAGTGA TTGCTACCCA
GAACTCTCTT TTTTAGGTGA CTATCAATGC GGTGAAGTGC TTGCACCACT CAACTACAGA
CGATATTACG GAGGTGAACC TTCCTCGGAC AACCAAATAT CTTTAAAATT TGTACGTATT
CCAGCGCAAA ACCCTGAAGC CCAAAAAGGC ACACTATTTT TTAACTACGG TGGCCCTGGT
GGACCGGCAA TACAAAATAC TATTTATCTT GGCAGTCAAA TGCTCACCCA AGAAGTTAGA
GATCAATACG ACCTCGTAGG ATTTGACCCA CGTGGCATAG GTGAAAGCAC CCCATTGAAA
TGCTTCACTC AATACGAAGA GTTTATGCCT TACTTAAGTA CACCAAGCTA CCCAAGAACT
GCAATTGAAG AGCTTGATAA AATTGATCTC TCTGACGTTA TTGCTAACGC CTGTGAAGCC
CGAGGCGGAG AACTATATAA AAACATGACA ACGGCGGATG TGGCGCGTGA TTTAGATTGG
CTACGCCGCG CATTCGGTGA CGATGAACTT AACTTTTACG GCATGTCGTA CGGTTCGTAT
GTAGGCGCAA CCTACGCCAA TATGTACCCT CGCAATGTAG GACGTATTAT TGTTGATGGC
GTAATCGATC CTGTCGCGTG GGCCACAGGC CGCGGCTTTC AGAGTTGGTT TGAGCCAGTT
ACATCGCGTA TCCGCAGCGA TAAAAGCTCT GCCGACAGTC TGAACGAGTT CTATCGCCTT
TGCAGCTTAG CGAACGACAA TTGCGCAATA AGCGAAGCAC CTGAGCAAGC GATGGCGACG
GCAATTATTT TAACAGAAGA CTACAGTGTT CCCGTTACCG ATATATACGG CAACACATTT
ATATTAACAG AACAAATTCT CGTGCAAGAA ACAATCAGCG CCATGTACTC GCCGACAGCA
TGGGAAAGCT TCGCTAATTT AATTGGTCAA CTTGTAGCGC TTTATAATTT TCTTGAAAGC
CAACCTACGC CATTGAATTC CGAAACACAG CTATCCAATG TAAATACTGC TTACAATTAT
TACAAAGTAG AACTCTACGG CGAAGACTCA GACCTCGAAG AATTCCAGGA TTACTCAGAA
GATGAGACGA TATTAACGAG TATTGAATGG TTTCCGAATG TGATGTGCTC TGATAGTAAT
AACCCCTACA GCCCATATAG CTGGATAGAC TCAAGCTACA GAGCAGAACA AAAACACGGT
TTAGCCGGAG CCTATTGGAA TTGGAGTTCC GCTCCCTGTG CGCATATTAA GCCTTCGCGC
TCGCGTTATG CTGGGCCATT TAGGCACTGG ACCAAGAACC CCATTTTAAT TATTAACACA
TACTTCGACC CTGCAACCGC CTTAGAAGGC GCAATTGCAC TTAATCGATT AATGCCAAAT
TCTCACTTGC TACCCGTAGA AGGCTGGGGA CATGTGTCGT TTCTATCTTC GCAATGCGCA
GATGAAGCGA GTTCGGAGTT TCTTATAAAT GGCAAATTGC CAGAGCACGG AACAGTGTGC
GAACCATCGA TAGCGCCATT TAATTTAAGT TTAGATATAG CTACGGCTGA TATAAAAGCA
CCTGCGAATA TAGAACGCCA ACGCAAACAC TGGGTTAATA GCGTCCATTC AAATCACCAC
AAGCTGCACG CTCGTAAACG CCTAAATAGA TTGCTCCGCA ATATCAAGCA GTAA
 
Protein sequence
MKNLFLLSTF TLLICTLPTA HAHRGFDSYQ PQIAWSDCYP ELSFLGDYQC GEVLAPLNYR 
RYYGGEPSSD NQISLKFVRI PAQNPEAQKG TLFFNYGGPG GPAIQNTIYL GSQMLTQEVR
DQYDLVGFDP RGIGESTPLK CFTQYEEFMP YLSTPSYPRT AIEELDKIDL SDVIANACEA
RGGELYKNMT TADVARDLDW LRRAFGDDEL NFYGMSYGSY VGATYANMYP RNVGRIIVDG
VIDPVAWATG RGFQSWFEPV TSRIRSDKSS ADSLNEFYRL CSLANDNCAI SEAPEQAMAT
AIILTEDYSV PVTDIYGNTF ILTEQILVQE TISAMYSPTA WESFANLIGQ LVALYNFLES
QPTPLNSETQ LSNVNTAYNY YKVELYGEDS DLEEFQDYSE DETILTSIEW FPNVMCSDSN
NPYSPYSWID SSYRAEQKHG LAGAYWNWSS APCAHIKPSR SRYAGPFRHW TKNPILIINT
YFDPATALEG AIALNRLMPN SHLLPVEGWG HVSFLSSQCA DEASSEFLIN GKLPEHGTVC
EPSIAPFNLS LDIATADIKA PANIERQRKH WVNSVHSNHH KLHARKRLNR LLRNIKQ