Gene Sde_0635 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_0635 
Symbol 
ID3964964 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp801714 
End bp803168 
Gene Length1455 bp 
Protein Length484 aa 
Translation table11 
GC content49% 
IMG OID637919696 
Product6-phosphogluconate dehydrogenase 
Protein accessionYP_526109 
Protein GI90020282 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0362] 6-phosphogluconate dehydrogenase 
TIGRFAM ID[TIGR00873] 6-phosphogluconate dehydrogenase, decarboxylating 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCAT TATCAGACAT AGGCCTAGTT GGCCTAGCCG TAATGGGGGA AAACCTCGTA 
CTCAACATGG AAAGCAAAGG CTTTACCGTA ACCGCATATA ACCGCTCGGC GGAGAAAGTG
GAGAAATTCT TGTCTGGCCG CGCTGCAGGT AAAAACATTC GCGGTGCTAG CGATGTTAAA
GACTTGGTTG CAAGCCTAGA GAAGCCACGT AAAGTAATGC TTATGGTTAA GGCTGGCCAG
CCAGTCGACG ACATGATTGA GCAATTAGTT CCACACTTAG AAGACGGCGA CATCATTATT
GATGGCGGCA ACACCCACTT CCCAGACACC ATTCGTCGCG CGAAAGCGTT AGAGCCTAAA
GGTATTCACT TTGTAGGCAG CGGCGTATCT GGTGGCGAAG AAGGCGCACT TAAAGGCCCC
TCTATTATGC CTGGTGGCAG CCAACACGCG TGGCAAGCTG TTAAGCCTAT CTTCCAAGCC
ATTTCAGCTA AAGTCGATGA CGGCTCACCC TGCTGTGATT ACGTTGGTCA AGACGGCGCT
GGTCACTTCG TAAAAATGGT ACACAACGGT ATCGAATACG GCGACATGCA GCTTATCTGT
GAAGCGTACC AAGTAATGAA AGAGTTACTT GGTTTATCTG CAGACGAAAT GCACCAAGTA
TTCGCCGAGT GGAACAATAC CGAATTAGAC AGCTACTTAG TAGAAATTAC CCGCGACATC
CTCGCCTATA AAGACGAAGA CGGCGCGCCT TTAGTAGATA AAATTCTAGA TACCGCAGGC
CAAAAAGGTA CCGGTAAGTG GACTGGCGTA TCTGCGTTAG AATTGGGTGT ACCTTTAACG
CTTATTGGTG AAGCCGTATT TGCTCGCTGC CTATCTGCAC AAAAAGCAGA GCGCGTTGAA
GCCTCACAAG TATTGAATGG CCCAGCAGTA AGCTTTGATG GCGATAAAAA ACAACTTATC
GAAGATTTAC GTCAAGCATT ACTCGGCGCA AAAATTGTTT CTTACGCGCA AGGCTATGTA
TTAATGCGCG AAGCAGCAAA AGAATACAAC TGGGACTTAA ACTACGGCGG CATTGCTTTA
ATGTGGCGCG GCGGCTGTAT TATTCGCTCT GCATTCTTGG GCGACATTAA AGCAGCTTAC
GATGCAAACC CAGAGCTTAC CAACCTAATG GTTGCCCCTT ATTTCAAAGA GAAGTTAGAA
GCAGCTCAAG CCGGTTGGCG ACGTGTGGTA GCAGCGGCAG TAACAAACGG TGTACCAGCA
CCTGCGTTAA CCTCTGCACT TAGCTACTTC GACGGCTACC GCTCTGCACG CTTGCCAGCA
AACTTGCTAC AAGCGCAGCG CGATTACTTC GGCGCGCACA CTTACGAGCG CACCGACCGT
GAACGCGGCG AGTTCTTCCA CACCAACTGG ACTGGCCGTG GCGGCGATAC CGCCTCTACT
ACCTATAACG TTTAA
 
Protein sequence
MKALSDIGLV GLAVMGENLV LNMESKGFTV TAYNRSAEKV EKFLSGRAAG KNIRGASDVK 
DLVASLEKPR KVMLMVKAGQ PVDDMIEQLV PHLEDGDIII DGGNTHFPDT IRRAKALEPK
GIHFVGSGVS GGEEGALKGP SIMPGGSQHA WQAVKPIFQA ISAKVDDGSP CCDYVGQDGA
GHFVKMVHNG IEYGDMQLIC EAYQVMKELL GLSADEMHQV FAEWNNTELD SYLVEITRDI
LAYKDEDGAP LVDKILDTAG QKGTGKWTGV SALELGVPLT LIGEAVFARC LSAQKAERVE
ASQVLNGPAV SFDGDKKQLI EDLRQALLGA KIVSYAQGYV LMREAAKEYN WDLNYGGIAL
MWRGGCIIRS AFLGDIKAAY DANPELTNLM VAPYFKEKLE AAQAGWRRVV AAAVTNGVPA
PALTSALSYF DGYRSARLPA NLLQAQRDYF GAHTYERTDR ERGEFFHTNW TGRGGDTAST
TYNV