Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_0635 |
Symbol | |
ID | 3964964 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 801714 |
End bp | 803168 |
Gene Length | 1455 bp |
Protein Length | 484 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637919696 |
Product | 6-phosphogluconate dehydrogenase |
Protein accession | YP_526109 |
Protein GI | 90020282 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0362] 6-phosphogluconate dehydrogenase |
TIGRFAM ID | [TIGR00873] 6-phosphogluconate dehydrogenase, decarboxylating |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGCAT TATCAGACAT AGGCCTAGTT GGCCTAGCCG TAATGGGGGA AAACCTCGTA CTCAACATGG AAAGCAAAGG CTTTACCGTA ACCGCATATA ACCGCTCGGC GGAGAAAGTG GAGAAATTCT TGTCTGGCCG CGCTGCAGGT AAAAACATTC GCGGTGCTAG CGATGTTAAA GACTTGGTTG CAAGCCTAGA GAAGCCACGT AAAGTAATGC TTATGGTTAA GGCTGGCCAG CCAGTCGACG ACATGATTGA GCAATTAGTT CCACACTTAG AAGACGGCGA CATCATTATT GATGGCGGCA ACACCCACTT CCCAGACACC ATTCGTCGCG CGAAAGCGTT AGAGCCTAAA GGTATTCACT TTGTAGGCAG CGGCGTATCT GGTGGCGAAG AAGGCGCACT TAAAGGCCCC TCTATTATGC CTGGTGGCAG CCAACACGCG TGGCAAGCTG TTAAGCCTAT CTTCCAAGCC ATTTCAGCTA AAGTCGATGA CGGCTCACCC TGCTGTGATT ACGTTGGTCA AGACGGCGCT GGTCACTTCG TAAAAATGGT ACACAACGGT ATCGAATACG GCGACATGCA GCTTATCTGT GAAGCGTACC AAGTAATGAA AGAGTTACTT GGTTTATCTG CAGACGAAAT GCACCAAGTA TTCGCCGAGT GGAACAATAC CGAATTAGAC AGCTACTTAG TAGAAATTAC CCGCGACATC CTCGCCTATA AAGACGAAGA CGGCGCGCCT TTAGTAGATA AAATTCTAGA TACCGCAGGC CAAAAAGGTA CCGGTAAGTG GACTGGCGTA TCTGCGTTAG AATTGGGTGT ACCTTTAACG CTTATTGGTG AAGCCGTATT TGCTCGCTGC CTATCTGCAC AAAAAGCAGA GCGCGTTGAA GCCTCACAAG TATTGAATGG CCCAGCAGTA AGCTTTGATG GCGATAAAAA ACAACTTATC GAAGATTTAC GTCAAGCATT ACTCGGCGCA AAAATTGTTT CTTACGCGCA AGGCTATGTA TTAATGCGCG AAGCAGCAAA AGAATACAAC TGGGACTTAA ACTACGGCGG CATTGCTTTA ATGTGGCGCG GCGGCTGTAT TATTCGCTCT GCATTCTTGG GCGACATTAA AGCAGCTTAC GATGCAAACC CAGAGCTTAC CAACCTAATG GTTGCCCCTT ATTTCAAAGA GAAGTTAGAA GCAGCTCAAG CCGGTTGGCG ACGTGTGGTA GCAGCGGCAG TAACAAACGG TGTACCAGCA CCTGCGTTAA CCTCTGCACT TAGCTACTTC GACGGCTACC GCTCTGCACG CTTGCCAGCA AACTTGCTAC AAGCGCAGCG CGATTACTTC GGCGCGCACA CTTACGAGCG CACCGACCGT GAACGCGGCG AGTTCTTCCA CACCAACTGG ACTGGCCGTG GCGGCGATAC CGCCTCTACT ACCTATAACG TTTAA
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Protein sequence | MKALSDIGLV GLAVMGENLV LNMESKGFTV TAYNRSAEKV EKFLSGRAAG KNIRGASDVK DLVASLEKPR KVMLMVKAGQ PVDDMIEQLV PHLEDGDIII DGGNTHFPDT IRRAKALEPK GIHFVGSGVS GGEEGALKGP SIMPGGSQHA WQAVKPIFQA ISAKVDDGSP CCDYVGQDGA GHFVKMVHNG IEYGDMQLIC EAYQVMKELL GLSADEMHQV FAEWNNTELD SYLVEITRDI LAYKDEDGAP LVDKILDTAG QKGTGKWTGV SALELGVPLT LIGEAVFARC LSAQKAERVE ASQVLNGPAV SFDGDKKQLI EDLRQALLGA KIVSYAQGYV LMREAAKEYN WDLNYGGIAL MWRGGCIIRS AFLGDIKAAY DANPELTNLM VAPYFKEKLE AAQAGWRRVV AAAVTNGVPA PALTSALSYF DGYRSARLPA NLLQAQRDYF GAHTYERTDR ERGEFFHTNW TGRGGDTAST TYNV
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