Gene Sde_0633 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_0633 
Symbol 
ID3964962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp798414 
End bp799724 
Gene Length1311 bp 
Protein Length436 aa 
Translation table11 
GC content50% 
IMG OID637919694 
Producthypothetical protein 
Protein accessionYP_526107 
Protein GI90020280 
COG category[S] Function unknown 
COG ID[COG3397] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.746615 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.741737 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGCAA AGAAAATTAC ATACTCCACT ATAGCCTTGG CCATCGCAGG GCTTTCTGGT 
AACGCACTAT CTCACGGCTT AATGGTAGAC CCGCCTTCGC GTAACGCGCT GTGTGGGATG
ATAGAAAAAC CTGACCAAGC AACATCACCC GCCTGCCAGC AAGCTTTCCA AAATGACTTT
AATGGCGGCT ACCAATTTAT GAGCGTGCTA ACCCACGACA TAGGTCGCCA AGGCGGCACG
TCTAATAATG TGTGTGGCTT TGATAGCGAA ACCTGGAATG GCGGTGCAAC CCCGTGGGAT
GCCGCAATTG ATTGGCCAAC CACTCAAATT AGTTCTGGCC CGTTAGAAAT AGATTGGAAT
ATTTCTTGGG GCCCTCACTG GGACGACACC GAAGAGTTTG TTTACTACAT TACCAAGCCT
GACTTTGTAT ACCAGGTAGG TGTACCGCTC AGCTGGAGCG ATTTCGAGGC AACACCTTTT
TGCCAACTCG ACTACAGCGA TGCAAACCCA AACGCAAACC CTGGCGTATC CACCACCAAA
AGTGCCAACC TATTTCACAC TCAATGTAAC GTACCTGCGC GCTCTGGCCG CCACGTGATT
TACGGTGAAT GGGGGCGCAA CTACTTTACC TACGAGCGAT TCCACGGCTG TATGGATGTT
ACCTTTGGCG GTAGCAACCC ACCCCCTAGC AACCAAGCGC CAACAGCTAA CGCTCAATCT
GTAAATGTAA GTAGCGGTAG CAGTGTCTCT ATTACCTTAA GCGGCAGCGA TGTAGATGGT
GTTATTAGCA GTTACGCAAT TGCAGCAGCA CCTAGTAACG GAAGTTTAAG CGGGTCTGGC
GCGCAGCGTT TATACACACC TAATGGCAAT TTCTCGGGTT CGGATAGCTT CCAATTCACA
GTAACCGATG ATGACGGAGC AACATCCAAT GCCGCGACCG TTAGCATTAA TGTAAGCTCT
CAACCAGAAC CAGAACCCGA ACCCGAGCCA GAACCAGAGC CCGAACCAGG AACTGGCGCT
AGCTGTGAGC ACGTTGTTGT AAATGCTTGG GATAGTGGCT TCCAAGGCGC TATTCGCATA
ACTAACACTA GCGACCAAAA TATTAACGGC TGGAATGTAA GCTGGAGCTA CAACAATGGC
ACTACAATTA GCCAGTTGTG GAATGCAAAC TTCTCGGGCA GCAACCCTTA CAGCGCAAGC
AACCTAGGTT GGAACGCAAC CATTCAACCA GGCCAAACTG TTGAATTTGG GTTTACCGGT
AACGGCTCTG TACCCGCGGC ACCAGCAGTA ACGGGTGCGG TTTGTAATTA G
 
Protein sequence
MFAKKITYST IALAIAGLSG NALSHGLMVD PPSRNALCGM IEKPDQATSP ACQQAFQNDF 
NGGYQFMSVL THDIGRQGGT SNNVCGFDSE TWNGGATPWD AAIDWPTTQI SSGPLEIDWN
ISWGPHWDDT EEFVYYITKP DFVYQVGVPL SWSDFEATPF CQLDYSDANP NANPGVSTTK
SANLFHTQCN VPARSGRHVI YGEWGRNYFT YERFHGCMDV TFGGSNPPPS NQAPTANAQS
VNVSSGSSVS ITLSGSDVDG VISSYAIAAA PSNGSLSGSG AQRLYTPNGN FSGSDSFQFT
VTDDDGATSN AATVSINVSS QPEPEPEPEP EPEPEPGTGA SCEHVVVNAW DSGFQGAIRI
TNTSDQNING WNVSWSYNNG TTISQLWNAN FSGSNPYSAS NLGWNATIQP GQTVEFGFTG
NGSVPAAPAV TGAVCN