Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_0633 |
Symbol | |
ID | 3964962 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 798414 |
End bp | 799724 |
Gene Length | 1311 bp |
Protein Length | 436 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637919694 |
Product | hypothetical protein |
Protein accession | YP_526107 |
Protein GI | 90020280 |
COG category | [S] Function unknown |
COG ID | [COG3397] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.746615 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.741737 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTCGCAA AGAAAATTAC ATACTCCACT ATAGCCTTGG CCATCGCAGG GCTTTCTGGT AACGCACTAT CTCACGGCTT AATGGTAGAC CCGCCTTCGC GTAACGCGCT GTGTGGGATG ATAGAAAAAC CTGACCAAGC AACATCACCC GCCTGCCAGC AAGCTTTCCA AAATGACTTT AATGGCGGCT ACCAATTTAT GAGCGTGCTA ACCCACGACA TAGGTCGCCA AGGCGGCACG TCTAATAATG TGTGTGGCTT TGATAGCGAA ACCTGGAATG GCGGTGCAAC CCCGTGGGAT GCCGCAATTG ATTGGCCAAC CACTCAAATT AGTTCTGGCC CGTTAGAAAT AGATTGGAAT ATTTCTTGGG GCCCTCACTG GGACGACACC GAAGAGTTTG TTTACTACAT TACCAAGCCT GACTTTGTAT ACCAGGTAGG TGTACCGCTC AGCTGGAGCG ATTTCGAGGC AACACCTTTT TGCCAACTCG ACTACAGCGA TGCAAACCCA AACGCAAACC CTGGCGTATC CACCACCAAA AGTGCCAACC TATTTCACAC TCAATGTAAC GTACCTGCGC GCTCTGGCCG CCACGTGATT TACGGTGAAT GGGGGCGCAA CTACTTTACC TACGAGCGAT TCCACGGCTG TATGGATGTT ACCTTTGGCG GTAGCAACCC ACCCCCTAGC AACCAAGCGC CAACAGCTAA CGCTCAATCT GTAAATGTAA GTAGCGGTAG CAGTGTCTCT ATTACCTTAA GCGGCAGCGA TGTAGATGGT GTTATTAGCA GTTACGCAAT TGCAGCAGCA CCTAGTAACG GAAGTTTAAG CGGGTCTGGC GCGCAGCGTT TATACACACC TAATGGCAAT TTCTCGGGTT CGGATAGCTT CCAATTCACA GTAACCGATG ATGACGGAGC AACATCCAAT GCCGCGACCG TTAGCATTAA TGTAAGCTCT CAACCAGAAC CAGAACCCGA ACCCGAGCCA GAACCAGAGC CCGAACCAGG AACTGGCGCT AGCTGTGAGC ACGTTGTTGT AAATGCTTGG GATAGTGGCT TCCAAGGCGC TATTCGCATA ACTAACACTA GCGACCAAAA TATTAACGGC TGGAATGTAA GCTGGAGCTA CAACAATGGC ACTACAATTA GCCAGTTGTG GAATGCAAAC TTCTCGGGCA GCAACCCTTA CAGCGCAAGC AACCTAGGTT GGAACGCAAC CATTCAACCA GGCCAAACTG TTGAATTTGG GTTTACCGGT AACGGCTCTG TACCCGCGGC ACCAGCAGTA ACGGGTGCGG TTTGTAATTA G
|
Protein sequence | MFAKKITYST IALAIAGLSG NALSHGLMVD PPSRNALCGM IEKPDQATSP ACQQAFQNDF NGGYQFMSVL THDIGRQGGT SNNVCGFDSE TWNGGATPWD AAIDWPTTQI SSGPLEIDWN ISWGPHWDDT EEFVYYITKP DFVYQVGVPL SWSDFEATPF CQLDYSDANP NANPGVSTTK SANLFHTQCN VPARSGRHVI YGEWGRNYFT YERFHGCMDV TFGGSNPPPS NQAPTANAQS VNVSSGSSVS ITLSGSDVDG VISSYAIAAA PSNGSLSGSG AQRLYTPNGN FSGSDSFQFT VTDDDGATSN AATVSINVSS QPEPEPEPEP EPEPEPGTGA SCEHVVVNAW DSGFQGAIRI TNTSDQNING WNVSWSYNNG TTISQLWNAN FSGSNPYSAS NLGWNATIQP GQTVEFGFTG NGSVPAAPAV TGAVCN
|
| |