| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0629 |
|---|
| Symbol | |
|---|
| ID | 3964958 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | + |
|---|
| Start bp | 795077 |
|---|
| End bp | 795730 |
|---|
| Gene Length | 654 bp |
|---|
| Protein Length | 217 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637919690 |
|---|
| Product | cob(I)yrinic acid a,c-diamide adenosyltransferase / PAS/PAC sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_526103 |
|---|
| Protein GI | 90020276 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2109] ATP:corrinoid adenosyltransferase |
|---|
| TIGRFAM ID | [TIGR00708] cob(I)alamin adenosyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 0.582307 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.65343 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGACA ACAATAGCAG TGCCTCTGAA AATACAAATT CTAATGAAAG CGCAAGTGAG
AAAGAGCAGC GTGAACATAA AGAAGCAATG CAAACCACGC AAAAAGTTGT GCGCGACAAA
ATAAAAGCCG CCAAAGAAAA ACGCGGGGTG GTTATTTATC TTTGGGGTAA TGGCAAGGGT
AAAAGTAGCT CGGGCTTCGG CACTCTGTTG CGCGCTGTGG GGCATGGTCA ACGCGCGGCT
ATTATTCAGT TTATTAAAGG CACTTGGAAA ACAGGTGAAG AGGCATTCTT TCGCGATCAC
CCAAGTGTTG AACATCATAT TATGGGTACC GGCTTCACCT GGGATAGCCA AGATAAACAA
AAAGATATTG CCGCCGCACA AGAAGTATGG CTAAAAGCAG AGCAGTGCTT GGCAAGCGAA
GACATTAACT TAGTGTTGAT GGATGAAATA ACGTATATGT TTGATTACGG TTATTTATCA
CTTGAAACGT GCATCGCTGC TATTAAAAAT CGTCCGCTTA AGCAAAACGT TATTCTTACC
GGTCGCAGCC CTATAGCCGA GCTTATAGAG CTTGCAGATA CAGTAAGCGA AATAAGAGAA
GTGAAACACG CGTTCCACGC CGGTGTTAAA GCGCAAAAAG GTATCGAATT TTGA
|
|---|
| Protein sequence | MTDNNSSASE NTNSNESASE KEQREHKEAM QTTQKVVRDK IKAAKEKRGV VIYLWGNGKG
KSSSGFGTLL RAVGHGQRAA IIQFIKGTWK TGEEAFFRDH PSVEHHIMGT GFTWDSQDKQ
KDIAAAQEVW LKAEQCLASE DINLVLMDEI TYMFDYGYLS LETCIAAIKN RPLKQNVILT
GRSPIAELIE LADTVSEIRE VKHAFHAGVK AQKGIEF
|
|---|
| |