Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_0626 |
Symbol | |
ID | 3964955 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 790686 |
End bp | 791798 |
Gene Length | 1113 bp |
Protein Length | 370 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637919687 |
Product | 3-oxoacyl-(acyl carrier protein) synthase III |
Protein accession | YP_526100 |
Protein GI | 90020273 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.90384 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.768713 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGTAT TTATAACAAG TAGCGGCCAT TTCTTACCCG GCCCACCCGT AACTAACCAA GCCATGGAAG AAATACTTGG CAAGGTACAC GGCAAACCCT CACGATTGCG AAAACGCATT TTACAATCTA ATGGCATTCA AACCCGACAC TACGCAATAG ACGCACAACA CAACACCACC ATTAGCAATA GCCAAATGGC AGCAAAGGCT GCTCAGAATT GTTTAGACAA TAGCTATCTA TCAAAACCCG CCGTGCAATT ACTAAGTTGT GCCACCAGCC AAGGTGATAT CGTGCTGCCA GGCTTTGGCA GTATGGTGCA GGCAGACTTG CAACTTGCCG ATATAGAACT GCACACCAGC CACGGCATTT GCTCTAGCAG TATGATGGCT TTAAAAGCGG CTTACACCAG CATTAAAGCA GAAGACAAAC AAAACGGTTT AGTGGTTGCC AGTGAACTCG CTTCGCGACT ATTTAAAGCC AGCCGTTACG AAGCGGTAAA TAACAGTGAA GAGCTAGACT TTAACGCCGA GTTTTTGCGC TGGATGCTTT CCGACGGCGC GGGCGCACTA CTATTAGAAA ACCGCCCAAG AAAACGCTGC TTTCGCATAG ATTGGATACG GGGCTTCTCC CATGCCGATG CCTTTCCTGT ATGTATGAGT GTAGGCTACC CCAAGCACAA TAACGGCGAT AAAAGCTGGC AAGATTACCC CACCTATAGC GAAGCCGAAC GCGAAGGTGC GCTGCTTATC CGCCAAGACG TAAGACTACT AGAACAAGTA GTAAAACTGG GGGTAGATGG TTTTTTACGC TTAATACACG AGCAATTTAT TACCCCCCAA AACATTAACC ATGTATTGTG CCACTACTCC TCCGATTATT TTCGATCGAA AATTTTCGAC ATGCTCAATA AAGCGGGCGT GGGTATAGCC GAGCATAAAT GGTATTCCAA CCTCGCCACC CGAGGTAATA CCGGCTGTGC ATCGCTATTT ATTATGCTCG ATGAATTTTC GCGCACTCAA CAATATACAC CCGGCGACAC CATAATATGC ATGGTGCCAG AAAGCGGGCG TTTTAATAAT GTATTTATGC AGTTAACGGT TGTAGATGAA TAA
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Protein sequence | MEVFITSSGH FLPGPPVTNQ AMEEILGKVH GKPSRLRKRI LQSNGIQTRH YAIDAQHNTT ISNSQMAAKA AQNCLDNSYL SKPAVQLLSC ATSQGDIVLP GFGSMVQADL QLADIELHTS HGICSSSMMA LKAAYTSIKA EDKQNGLVVA SELASRLFKA SRYEAVNNSE ELDFNAEFLR WMLSDGAGAL LLENRPRKRC FRIDWIRGFS HADAFPVCMS VGYPKHNNGD KSWQDYPTYS EAEREGALLI RQDVRLLEQV VKLGVDGFLR LIHEQFITPQ NINHVLCHYS SDYFRSKIFD MLNKAGVGIA EHKWYSNLAT RGNTGCASLF IMLDEFSRTQ QYTPGDTIIC MVPESGRFNN VFMQLTVVDE
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