Gene Sde_0626 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_0626 
Symbol 
ID3964955 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp790686 
End bp791798 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content46% 
IMG OID637919687 
Product3-oxoacyl-(acyl carrier protein) synthase III 
Protein accessionYP_526100 
Protein GI90020273 
COG category[I] Lipid transport and metabolism 
COG ID[COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.90384 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.768713 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGTAT TTATAACAAG TAGCGGCCAT TTCTTACCCG GCCCACCCGT AACTAACCAA 
GCCATGGAAG AAATACTTGG CAAGGTACAC GGCAAACCCT CACGATTGCG AAAACGCATT
TTACAATCTA ATGGCATTCA AACCCGACAC TACGCAATAG ACGCACAACA CAACACCACC
ATTAGCAATA GCCAAATGGC AGCAAAGGCT GCTCAGAATT GTTTAGACAA TAGCTATCTA
TCAAAACCCG CCGTGCAATT ACTAAGTTGT GCCACCAGCC AAGGTGATAT CGTGCTGCCA
GGCTTTGGCA GTATGGTGCA GGCAGACTTG CAACTTGCCG ATATAGAACT GCACACCAGC
CACGGCATTT GCTCTAGCAG TATGATGGCT TTAAAAGCGG CTTACACCAG CATTAAAGCA
GAAGACAAAC AAAACGGTTT AGTGGTTGCC AGTGAACTCG CTTCGCGACT ATTTAAAGCC
AGCCGTTACG AAGCGGTAAA TAACAGTGAA GAGCTAGACT TTAACGCCGA GTTTTTGCGC
TGGATGCTTT CCGACGGCGC GGGCGCACTA CTATTAGAAA ACCGCCCAAG AAAACGCTGC
TTTCGCATAG ATTGGATACG GGGCTTCTCC CATGCCGATG CCTTTCCTGT ATGTATGAGT
GTAGGCTACC CCAAGCACAA TAACGGCGAT AAAAGCTGGC AAGATTACCC CACCTATAGC
GAAGCCGAAC GCGAAGGTGC GCTGCTTATC CGCCAAGACG TAAGACTACT AGAACAAGTA
GTAAAACTGG GGGTAGATGG TTTTTTACGC TTAATACACG AGCAATTTAT TACCCCCCAA
AACATTAACC ATGTATTGTG CCACTACTCC TCCGATTATT TTCGATCGAA AATTTTCGAC
ATGCTCAATA AAGCGGGCGT GGGTATAGCC GAGCATAAAT GGTATTCCAA CCTCGCCACC
CGAGGTAATA CCGGCTGTGC ATCGCTATTT ATTATGCTCG ATGAATTTTC GCGCACTCAA
CAATATACAC CCGGCGACAC CATAATATGC ATGGTGCCAG AAAGCGGGCG TTTTAATAAT
GTATTTATGC AGTTAACGGT TGTAGATGAA TAA
 
Protein sequence
MEVFITSSGH FLPGPPVTNQ AMEEILGKVH GKPSRLRKRI LQSNGIQTRH YAIDAQHNTT 
ISNSQMAAKA AQNCLDNSYL SKPAVQLLSC ATSQGDIVLP GFGSMVQADL QLADIELHTS
HGICSSSMMA LKAAYTSIKA EDKQNGLVVA SELASRLFKA SRYEAVNNSE ELDFNAEFLR
WMLSDGAGAL LLENRPRKRC FRIDWIRGFS HADAFPVCMS VGYPKHNNGD KSWQDYPTYS
EAEREGALLI RQDVRLLEQV VKLGVDGFLR LIHEQFITPQ NINHVLCHYS SDYFRSKIFD
MLNKAGVGIA EHKWYSNLAT RGNTGCASLF IMLDEFSRTQ QYTPGDTIIC MVPESGRFNN
VFMQLTVVDE