| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0621 |
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| Symbol | |
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| ID | 3964950 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 784740 |
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| End bp | 785987 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637919682 |
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| Product | response regulator receiver modulated diguanylate cyclase |
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| Protein accession | YP_526095 |
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| Protein GI | 90020268 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.649156 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATAGAA TTTTAGTTGT AGAAGATAGC CCGATTGTAA GAAAAATTAT CAATCACGTT
ATGGCGGGCT TCCCGCAGTT TAAGCCGGTT TACACTACCA CCTTAGCCGA GACCAAGGCA
CTACTAGAAA GTGAAGCTGA ATCAATTTTC GCCGCTTTAG TGGATTTAAG TTTACCCGAT
GCGCCAGATG GCGAAGTGGT GGATTACGTT TTAAATAATC ACATTCCAAC TATTGTGCTC
ACCGGCAGCT TCGATACGGA GCGGCGAGAA CAGTTGTTGG CGAAAGGGAT TGTCGATTAC
GTTACCAAGG AGGGGCGCTA CTCTTACCAG TATGCACTGG GGGTGTTGGC TCGCCTCGTT
AAAAATCAAA AAATAAAAGT GATGGTGGTG GATGACTCCG CCACAGCGCG TAATTTTGTA
GTGGGTTTGC TGCGCTTACA TTTATTTGAA GTGTATGACG CAGACGATGG TGCTGAAGCT
ATACGTGTAT TTATAGATAA CCCCGATATT AAAATGATTA TTACCGATTT TAATATGCCG
CGCATGGATG GCTTTGAGTT AGTGCAGCAT ATGCGCCGTA AATACGATAA GTCGGATCTC
ATTATGATTG GCTTGTCGTC GGAAACCGAC GGCACGCTCT CTGCAAAATT CATCAAAAAT
GGCGCTAATG ATTTTTTGCG CAAACCGTTT AATCACGAAG AATTTTTCTG CCGCGTTTCT
CACAATATGG ATTTTATGGA AATGTTTGAG GCCCTCAAAG ATTCAGCCAA TAGGGATGAT
CACACCGGCG CTTATAAACT GTCGCATTTT AATGTGCAAG GTGATGACAT GTTTGAGCGC
GCGCTTGCCA GTGGCACGCC TCTAGCCTGT GCGGTTATCG ATTTAGATGA TCTGTCTGAA
ATTATCAATG AATACGGCCC TGAAGCTGGC GATGTAGTGA TGGAGCAAGT ATCTAGCTTT
TTAGTATCGT CTTTCGAGCG TTTTTTACTT GCTCGCGCTG GTACAGAGTT GTTTTACGCG
TTAATGCCGG GGCTAGACAA TGCGAAAGCT ACCGCCTTTG TCGAACGGGT GCGTCAAATA
GTCGGTGGGA AATTTATTGA CCTTGGTGGT GCTGAGGTGA GTCTTAGTTT TAGCGCCGGT
GTGTCGAATG TAATGGGGAA TAATCTTTCC GAATTAGTTG AACATGCCCA TCAGTCGCTT
CTGCGCGCGC GCGATGCGGG TGGTGATTTG GTTATTGGTG ACGACTAA
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| Protein sequence | MHRILVVEDS PIVRKIINHV MAGFPQFKPV YTTTLAETKA LLESEAESIF AALVDLSLPD
APDGEVVDYV LNNHIPTIVL TGSFDTERRE QLLAKGIVDY VTKEGRYSYQ YALGVLARLV
KNQKIKVMVV DDSATARNFV VGLLRLHLFE VYDADDGAEA IRVFIDNPDI KMIITDFNMP
RMDGFELVQH MRRKYDKSDL IMIGLSSETD GTLSAKFIKN GANDFLRKPF NHEEFFCRVS
HNMDFMEMFE ALKDSANRDD HTGAYKLSHF NVQGDDMFER ALASGTPLAC AVIDLDDLSE
IINEYGPEAG DVVMEQVSSF LVSSFERFLL ARAGTELFYA LMPGLDNAKA TAFVERVRQI
VGGKFIDLGG AEVSLSFSAG VSNVMGNNLS ELVEHAHQSL LRARDAGGDL VIGDD
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