| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0619 |
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| Symbol | |
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| ID | 3964948 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 781831 |
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| End bp | 783114 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637919680 |
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| Product | cellulose binding, type IV |
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| Protein accession | YP_526093 |
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| Protein GI | 90020266 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0677] UDP-N-acetyl-D-mannosaminuronate dehydrogenase |
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| TIGRFAM ID | [TIGR03026] nucleotide sugar dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATAATA GAAAAATTTC CGTCATTGGA TTGGGCTACG TAGGCCTACC TGTTGCCGTG
GCTTTTGGTA AATCCCAACA GACCATTGGC TTTGATATAA ACCAAGGCCG CGTAGAAGAG
CTACAAAAGG GAACTGACCG CACCTTAGAG GTCACCAGCG AAGAACTCGC CCAAACAGAC
ATACTGTTTA CGTGCACCCC TGCCGACCTG CAAAAAGCCG ATTTTCACAT TGTAGCGGTA
CCTACCCCCA TCAACGATTC CAAACAACCC GACCTTCGCC CTCTCATAGG CGCTTCCAAA
ACTTTGGGGC CGCAATTGAA AAAAGGCGAT ATTGTTGTAT ATGAATCCAC GGTATACCCT
GGGGCCACCG AAGAAGATTG CGTACCCGTA TTAGAAGCCG AATCTGGCCT TAAGTGCGGC
GTCGACTTTT TTGTGGGCTA CTCGCCAGAG CGTATCAACC CAGGCGACAA AGAGCACACC
TTCACCAAAA TCACCAAAGT GGTTTCTGGC CAAACACCTG AAGTATTAGA GATTGTTGCC
GCGGTATACG GCAGTGTTGT AACCGCAGGC GTACACAAAG CAACAAGCAT CAAAGTTGCC
GAAGCCGCGA AGGTTATCGA AAACACTCAG CGCGACCTCA ATATCGCCCT TATGAACGAG
CTATCAGTTA TCTTTAACCG CATGGATATC GATACCATCG ACGTGCTCGA AGCCGCTGGC
ACCAAGTGGA ACTTCTTACC TTTCCGCCCA GGCTTGGTTG GCGGCCACTG TATTGGTGTA
GACCCTTACT ACCTCACGCA CAAAGCCGAG CGCATGGGCT ACAACCCCGA AGTTATTTTG
GCTGGTCGTC GCATTAACGA TTCCATGGGT GCCTATGTGG TGCAGCAGGT AATTCGCCAG
CTAGCGCAAG CAGACAAGCC TATAAAAGGC GCCAAGGTTG CTGTTATGGG CCTAACCTTT
AAAGAAGATT GCCCAGACCT GCGCAACTCT CGCGTTATTG ACGTAATTAA AGAATGCCAA
ACCTGGGGCA TAGAGCCGTT AGTGCACGAC CCCATGGCTG ACCCCGCCGA AGCACAGCAC
GAATACGGTG TACAGCTTGT AGGCGACGAC GCAATTAAAA ACGTAGATGC ACTTATTTTT
ACCGTGGCGC ACAAGCATTA CAAGCAGTGG AGCACCGAGC AAATTATTGC TCGCCTAGCA
CCGGAAGGCT CTGTATTTGA CGTTAAAGGA ATGCTAAACC GCGAAGCGTT TGCCCAAGCC
GGCACCACAC TCTGGAGAAT GTAA
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| Protein sequence | MHNRKISVIG LGYVGLPVAV AFGKSQQTIG FDINQGRVEE LQKGTDRTLE VTSEELAQTD
ILFTCTPADL QKADFHIVAV PTPINDSKQP DLRPLIGASK TLGPQLKKGD IVVYESTVYP
GATEEDCVPV LEAESGLKCG VDFFVGYSPE RINPGDKEHT FTKITKVVSG QTPEVLEIVA
AVYGSVVTAG VHKATSIKVA EAAKVIENTQ RDLNIALMNE LSVIFNRMDI DTIDVLEAAG
TKWNFLPFRP GLVGGHCIGV DPYYLTHKAE RMGYNPEVIL AGRRINDSMG AYVVQQVIRQ
LAQADKPIKG AKVAVMGLTF KEDCPDLRNS RVIDVIKECQ TWGIEPLVHD PMADPAEAQH
EYGVQLVGDD AIKNVDALIF TVAHKHYKQW STEQIIARLA PEGSVFDVKG MLNREAFAQA
GTTLWRM
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