| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0618 |
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| Symbol | |
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| ID | 3964947 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 780820 |
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| End bp | 781827 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637919679 |
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| Product | oligopeptide transporter OPT |
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| Protein accession | YP_526092 |
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| Protein GI | 90020265 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGTAT TGGTTACCGG CGCAGCCGGC TTTATTGGCT ACCACTTAAG CGAACGCCTC
CTGGCCCGTG GCGACACCGT TGTAGGTATC GACAACATTA ACGATTACTA CGACCCCAAC
ATTAAACTCG CGCGCCTCGA GCGCTTAAAT AAGCACGAAG CGTTTGAGTT CCAAAAGCTC
GACTTGGCCG ATCGCGGCGG CATGGAAACC TTGTTTAGCA ACCACCAGTT TGATCGCGTA
GTGAACTTAG CGGCGCAAGC CGGTGTGCGT TACTCTATCG AAAACCCACA CGCCTATGTC
GATTCCAACA TAGTGGGCTT TTTGAATATA CTGGAAGGCT GTCGCCACAC CAACGTACCA
CACCTAAGCT ATGCATCTTC AAGCTCTGTA TATGGCGCCA ATACGTTGCA GCCATTCTCT
GAGCACCACA ACGTGGACCA CCCAGTTGCG CTTTACGCAG CAAGTAAAAA AGCCAACGAA
CTTATGGCGC ACTCGTACAG CAGCCTTTAT AAGTTACCTA CCACAGGCCT GCGCTTCTTT
ACCGTTTACG GCCCTTGGGG TCGCCCAGAT ATGGCGCTAT TTTTGTTTAC CAAAGGCATT
TTGGAAGGTA AGCCAATTAA TATTTTCAAT AATGGCGAAA TGTACCGTGA CTTCACCTAC
ATTGATGACA TTATTGAAGG CGTTGTGCGG GTTACCAATA AAATTGCTGA GCCCAACCCG
CTGTGGACCG GCGACAAGCC AGACCCAGCA ACTAGTTATG CGCCATTTAA GGTGTATAAC
ATTGGCAACA ACAACCCCGT TAAATTAATG GATTTTGTTG AAGCCATTGA AAACGAGCTA
GGCATAAAAG CCATCAAAAA CATGATGCCG ATGCAAGCCG GTGATGTTCC AGGCACCAGC
GCCGACGTAC AATCGTTAAT GGATGATGTG GGCTTCAAGC CAGAAATCAC CGTTCAACAA
GGCATTAAGC AGTTTGTTGG CTGGTATAAA GAATATTTTA AAGTATAA
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| Protein sequence | MKVLVTGAAG FIGYHLSERL LARGDTVVGI DNINDYYDPN IKLARLERLN KHEAFEFQKL
DLADRGGMET LFSNHQFDRV VNLAAQAGVR YSIENPHAYV DSNIVGFLNI LEGCRHTNVP
HLSYASSSSV YGANTLQPFS EHHNVDHPVA LYAASKKANE LMAHSYSSLY KLPTTGLRFF
TVYGPWGRPD MALFLFTKGI LEGKPINIFN NGEMYRDFTY IDDIIEGVVR VTNKIAEPNP
LWTGDKPDPA TSYAPFKVYN IGNNNPVKLM DFVEAIENEL GIKAIKNMMP MQAGDVPGTS
ADVQSLMDDV GFKPEITVQQ GIKQFVGWYK EYFKV
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