| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0615 |
|---|
| Symbol | |
|---|
| ID | 3965022 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | - |
|---|
| Start bp | 777092 |
|---|
| End bp | 777973 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 637919678 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_526091 |
|---|
| Protein GI | 90020264 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3735] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAATCAT TTATCAACCG TTTAATTGCG GCAACCTTAC TTTTAACTGC CGTATTAACA
GTACCTACTG CTATTGCAGA AACATCGGTA TTCAAAGTAA GCAAAGGCGA AAACAGCACT
TATCTGCTAG GCACATTCCA TTTACTAAAC GCCGCCGACC ACCCATTACC CGGCGAATTT
CAACAAGCCT ACAACGCTGC CAGCACTATT TATTTTGAAG CAGATCTACA GGCCGCCCAA
TCTCCCGAAT TTCAAATGAA ATTTTTCAAA GCCATTTCAG CGCCAAGTGG TAGCACCCTA
CAAACCTTAA TTAAGCCTGA AACTTATATG GCATTAGAAG CCTTTATGGC AAAAAAACAA
ATGCTCATCA CCAACTTTGC GCCATTTTCG CCTGCGGGCG CAGCCCTTAT GCTCACCATG
GCGGAATATC AAAAACTGGG CATGATGCCC GAGTACGGTG TGGATCAATT CTTTTTTAGC
AGAGCGCAAG GCGACGGCAA AACCATAGGC CACTTAGAAA CCATTGATGA ACAATTAAGC
TTTATAGCCA ACTTGGGCAA AGGCCAAGAA GACGAAATGA TAATGTCCAC AATTACAGAG
CTAAACACGC TTGAAAAATC TGTGGGCGAC CTGAAAAAAG CTTGGCGTAG CGGTAACTCA
AAACAACTAG ATAAAATATC GCTAAAAGAA ATGCGAGAGA AGTTTCCAGA CACCTACGCA
GAGATGATTG TTAACCGCAA CAATAAATGG ATGCCAGAAA TAGAAGCCAT GCTAGCAGAT
AAACCCACAG AAGCCGTTAT GGTAGGCGCA CTGCATTTAG TGGGGCCAGA TGGTTTAATA
GAACTACTTA AAAAGAAAGG CTACAAAGTA ACTCAAATAT AA
|
|---|
| Protein sequence | MQSFINRLIA ATLLLTAVLT VPTAIAETSV FKVSKGENST YLLGTFHLLN AADHPLPGEF
QQAYNAASTI YFEADLQAAQ SPEFQMKFFK AISAPSGSTL QTLIKPETYM ALEAFMAKKQ
MLITNFAPFS PAGAALMLTM AEYQKLGMMP EYGVDQFFFS RAQGDGKTIG HLETIDEQLS
FIANLGKGQE DEMIMSTITE LNTLEKSVGD LKKAWRSGNS KQLDKISLKE MREKFPDTYA
EMIVNRNNKW MPEIEAMLAD KPTEAVMVGA LHLVGPDGLI ELLKKKGYKV TQI
|
|---|
| |