| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0609 |
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| Symbol | |
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| ID | 3965016 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 769164 |
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| End bp | 771260 |
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| Gene Length | 2097 bp |
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| Protein Length | 698 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637919672 |
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| Product | hypothetical protein |
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| Protein accession | YP_526085 |
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| Protein GI | 90020258 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4447] Uncharacterized protein related to plant photosystem II stability/assembly factor |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.909747 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACTC GGCACCCAAA AAGAAAGCTC GCCCTACTTA TTGCGGCTTT GTGCCTAGGC
TGTGAAAAAT CACCACCACA AGCAACCCCC GCGCAACACG CCAGCCCTTT GCCCTCTAAA
GCCTTTCACG TTGTTAACCC CAATCTTTAT GCATCGCTAG CTAGCAACGA TGGCTCCACA
CTACTAACTG CGGGTACCGA CGGCATAATT AAATATTCGA GAGATGGTCA ACTTTGGCAC
AACGCCAATA CATCTAACAC TCAGCACGCA ATATTCGACC TACAACAAAA CTCACACACA
GGCACATTAA TAGCCGTTGG CGATTTCGGC ACAATTTTAC GTTCGACAGA TGAAGGCAAA
CATTGGGCTA AACAAACGTC GGACACTACC CGCCCAATTA CACGCCTTAC CTATAGCCGT
TTTGCTAAAA CTTGGCTGGC GGTTGGCGCC GAAGGTACTG CACTTAAAAG CGTGGATGAC
GGTATAAACT GGCAAAAAAT CGACGGCCTA ACGCTTCAAG CCTTACAGAA AGTACAATCT
ATCGACGCAA CAAAAACCTG GCTAATCGCT GCCGAACAAA ATGTGTGGTT AAGCACAGAC
CAAGGCTTGC ATTGGCATAC TGCACCTATT GCCAATAATT TATCTGTTAC AAGCATAACG
TCTTTTTCGC CAAAGAACAT AACGCTTGCT ACAACCAGTA ATGGTGAGTT GCTACTTCAA
ACCAATAGCG GTTGGCTTAA AAAACCTATT TCTCGAGGCA AGTACATTTC TGCCTTGGCC
CACAACAATT CAACATTAGT TGCAGCTAGC AGTGACGGCT GGGTGTTCAC ATCCGAAAAC
TTAGGCGATA CCTGGATTGG CAGAAAATTA AACGACAATT ACATTGCAAC CATTGTGTGG
CACCCCACTG CACAAAAATT TGTACTTGCG GGTAGTGGCG CAACCCTTTT TGTGTCGGAT
CAAAACGGGT TAGACTGGCA AAATATTCCT ACCGCGTTAA CGGACGACTT TGAAACACTT
ATACCCTTAG AAAATAACAA TACAGTAACA GCGCTGGGAA TTGGCTCACA AACAGCCACT
ATTTCTCTGC AAGATAACAG CGTACGCCAT ACTCAACAAA GTTTAAGCGG GTTTGTGCAC
AGCATTAATT GGCTGCCAAG TGGTAGGGTT ATAACCTCGG GCGCAGAAGG CTGGCTAAAA
AAGTCTGATA GCTTCGGAAA AAGCTGGGAA CAAGTTTTAG CTAGCACGAG TAATAGCGAT
TACTTATTTT CGCTAAAATA CTTACCCCAA AGTAAAACAT TATTAGCTGG CGGCCCACCG
GGCGTTATTT TTCGCTCAGA AGATAACGGC GACACGTGGG AAAAAGTACT CGAAGCTGAA
GAAGCCAGCG ACGGACATTT TCATACTTTA ATTACCGATC CCAAGCGCGA AATAGTCGTC
GCACTTGCAA GCCCGGGGCG TGTACGCTAT TCGCTCGACA CGGGAAAAAC GTGGGAAATT
GCCAATACAG ATACTAGCTC GCACTTATAC AACGGTGAAG TAAACCCAGA AACCGGTACC
ATTTTAGCCG TTGGTCAAAA TAGCGTTGTA CAACGCTCGC AGGACGGTGG CCTTTGGCAT
AAAACCGAAT TACTTGGCAG TGAAAGTTTA CAGGCAATAA CCTTTAGCCC TTACACCAAT
ACTTGGTTTA TTGGCGGCGA AGGGGGGGCG CTATGGCGCT CGGAGGACGA CGCAAAAACT
TGGCAACGTT TAGATAGTAA AACATTGCGC TACATATATA ACTTGGCAAC ATTAAAAAAT
AATACTTTAC TCGCAACCGG CAACAAAGGC TTAATACTGC GCTCTGATGA CAATGGCGAT
AGCTGGCACA ACGTTCCATC AGGTGTTGAA GAAAATCTTC GCGCACCACT GGAAGCAAAT
AATACTATTT ATATTTCTGG GCGCAACGGC AGTATTATTA CCTCTATTGA TGGCGGAAAA
AGTTGGCAAA TCGAAGCATC GCATACTGCC GAATCTTTAA GGGTAATGGC AGCGTCGTCA
GATAGTAAAC ATGTTATTGC AGCGGGAAGA AGAATTGTTG TAATGGGTGA AAATTAA
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| Protein sequence | MKTRHPKRKL ALLIAALCLG CEKSPPQATP AQHASPLPSK AFHVVNPNLY ASLASNDGST
LLTAGTDGII KYSRDGQLWH NANTSNTQHA IFDLQQNSHT GTLIAVGDFG TILRSTDEGK
HWAKQTSDTT RPITRLTYSR FAKTWLAVGA EGTALKSVDD GINWQKIDGL TLQALQKVQS
IDATKTWLIA AEQNVWLSTD QGLHWHTAPI ANNLSVTSIT SFSPKNITLA TTSNGELLLQ
TNSGWLKKPI SRGKYISALA HNNSTLVAAS SDGWVFTSEN LGDTWIGRKL NDNYIATIVW
HPTAQKFVLA GSGATLFVSD QNGLDWQNIP TALTDDFETL IPLENNNTVT ALGIGSQTAT
ISLQDNSVRH TQQSLSGFVH SINWLPSGRV ITSGAEGWLK KSDSFGKSWE QVLASTSNSD
YLFSLKYLPQ SKTLLAGGPP GVIFRSEDNG DTWEKVLEAE EASDGHFHTL ITDPKREIVV
ALASPGRVRY SLDTGKTWEI ANTDTSSHLY NGEVNPETGT ILAVGQNSVV QRSQDGGLWH
KTELLGSESL QAITFSPYTN TWFIGGEGGA LWRSEDDAKT WQRLDSKTLR YIYNLATLKN
NTLLATGNKG LILRSDDNGD SWHNVPSGVE ENLRAPLEAN NTIYISGRNG SIITSIDGGK
SWQIEASHTA ESLRVMAASS DSKHVIAAGR RIVVMGEN
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