| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0598 |
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| Symbol | |
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| ID | 3965005 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 747151 |
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| End bp | 748884 |
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| Gene Length | 1734 bp |
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| Protein Length | 577 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637919661 |
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| Product | Alpha-L-arabinofuranosidase |
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| Protein accession | YP_526074 |
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| Protein GI | 90020247 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3507] Beta-xylosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.628109 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATTA AGTGCTTACT CCTTGCTGTT TACGCGGGTC TACTTGCGGC TTGCGCGCTG
GACGCGCCGC TCAAAACCTC AAGTAAACCG CTAGCGCATT TTTCGTGGTT TGAATATCAA
GGTAACGACG AGATATTTAA GGCTCCACTC GCCTCAAATC AATACCAAAA CCCCATACTC
GCCGGCTACC ACCCAGACCC AAGTATTGTG CGAGTAGGCG AAGATTATTA TTTGGTGAAC
TCCACCTTTG GCTTCTACCC TGGCATTCCA GTATTTCACA GCCGTGACTT AGTGAATTGG
ACCCAACTGG GTAACGCTAT TCACCGCCCA GAGCAACTTT CATTTGATGG TATTCACTTA
GGCTACAACG GCGTTTATGC ACCGGCAATC GAATACCGCG ACGGGACCTT TTACGTAATA
AATACCTGCG TAGCCTGCGG AGGAAATTTT ATCGTTACCG CCACCAATCC CGCGGGCCCC
TGGTCAGACC CAATATGGCT ACCAGAGGTA ATTGGCATAG ACCCCTCGCT ATTTTTCGAC
GAGGACGGCA AAACCTATAT CGTGCATCAT CGTAATCCAC CTGTGCAGAA ATACCCTGCC
CACACAGCCC TGTGGGTAAT GGAAGTTGAC TCCAAAACAT TTGCGCCGGT ATCTGACGAT
GTAATGCTTG TGGACGGTGG CGACGAAGCG CCATGGCACA CAGAATATAT TGAAGGGCCG
CATATATATA AAATTGATGG CACCTACTAC CTCTATGCCC CTGGTGGCGG CACGGGATAC
TTCCACGGCC AATTGGTGTA TAGATCTGAC AATGTATTTG GACCCTACGA AGCCAACCCC
AATAACCCTG TGTTGACTCA AGTTGGTTTA CCCGACGACA GAGAACACCC TGTAACGGCA
ACGGGTCATG CAGATTTATT TCAAGATACC AACGGCGACT GGTGGACGGT ATTTCTGGGT
ACTCGCGTTT ACGATTTAGC TAAGCCACCA CAAGACCCCG GCAATTTTGC CACCGGACGC
GAAACATTTA TGTTGCCAGT AACATGGCAA AACGGCTGGC CACACGTGCT CGAAAAAGGC
GAGGCTGTGC CCTACCGAGT AACCAAACCC AAATTACCTG CAGGCAAACC CGCCCCGCGC
GCAATGACTG GAAACTTTAC TGTGCGCGAG GAATTTACCA ACGCTTCGCT TGCCCCCCAC
TGGCTATTTG TTCGCACACC GCGTTCCAAA TGGTGGCAAA CAGGTAATGG CGAACTTATT
TTAGAAGCGC GCGCCGATAC CATTGGGGCA GTTAACCAGC CGTCGTTTAT TGGCCGACGG
CTCGCTCATA TGACGGCCTC CTTCGCCACC CAACTAACCT TTAACCCACA CACCGTTGGC
GACGAAGCAG GGTTACTCGC CGTACAAAAC GACGAACACT TTTACGCCTT TGGCCTAGGG
TTAAACAGTA AAGGGCAAAC CGTTTTGCGC GTGCGTAAAA AAGCGGGTAA AAATGAATCG
ATAAGGGGAG ATACGGTTGC CGAGCAGGTT GTTAAGCTTA AGCACGGCCA CCCTATTTAC
CTGCGTGTAA ATATAGGTAA AGCCGAATTA AATTTCGCGT ATAGCACCAA CGGCAAACGC
TACACCACCT TGTTGAACCA AGCCGATGCC AACCTACTTA CCACAGCTAA AGCGGGCGGG
TTTACTGGCG CAGTAGTGGG TATGTACGCC GAATCCACCG CACAACAAAA CTAA
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| Protein sequence | MKIKCLLLAV YAGLLAACAL DAPLKTSSKP LAHFSWFEYQ GNDEIFKAPL ASNQYQNPIL
AGYHPDPSIV RVGEDYYLVN STFGFYPGIP VFHSRDLVNW TQLGNAIHRP EQLSFDGIHL
GYNGVYAPAI EYRDGTFYVI NTCVACGGNF IVTATNPAGP WSDPIWLPEV IGIDPSLFFD
EDGKTYIVHH RNPPVQKYPA HTALWVMEVD SKTFAPVSDD VMLVDGGDEA PWHTEYIEGP
HIYKIDGTYY LYAPGGGTGY FHGQLVYRSD NVFGPYEANP NNPVLTQVGL PDDREHPVTA
TGHADLFQDT NGDWWTVFLG TRVYDLAKPP QDPGNFATGR ETFMLPVTWQ NGWPHVLEKG
EAVPYRVTKP KLPAGKPAPR AMTGNFTVRE EFTNASLAPH WLFVRTPRSK WWQTGNGELI
LEARADTIGA VNQPSFIGRR LAHMTASFAT QLTFNPHTVG DEAGLLAVQN DEHFYAFGLG
LNSKGQTVLR VRKKAGKNES IRGDTVAEQV VKLKHGHPIY LRVNIGKAEL NFAYSTNGKR
YTTLLNQADA NLLTTAKAGG FTGAVVGMYA ESTAQQN
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