| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0589 |
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| Symbol | |
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| ID | 3964996 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 731243 |
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| End bp | 733360 |
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| Gene Length | 2118 bp |
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| Protein Length | 705 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637919652 |
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| Product | glycosidases-like |
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| Protein accession | YP_526065 |
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| Protein GI | 90020238 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.361866 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0110561 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAACGC AAAATGCCAC CATTACTCGA CTAGTTTTAT TCCTTAGCTT AAGCCTCGCC
ATTAGCGCGT GTAATGGTAA CGGCCCCAAG CAAAATACTA TTAGCGAACA AACGCCACCT
GCAGATCAAA CACCCGCGCA ACCAGACGAT ACGGCGGGCG CAGACACAGA AGGAACAGAA
GACCCAAAAG AAACACCAGA TACTGAAAAT AATAGCCCCA CCGTTCGTAT TCACTACTTA
AATAGCAATC AGGCCTACGA TAACTGGGGC TTACATCTTT GGGGCGATGC AATTGCAAGC
AGTACAGCCA CAAATTGGAC ATCTCCTTTT GCACTAACAC GCGCTGAAAA CGATTACGGC
CTTTACGAAG TGCCCCTTGC CGACCCAAAC GGCACGTTTA ATTTTATTAT GCACTTTGGC
GACTTTAAAA ACCCCGCCTA CGATTTTTCT ATTATTCCAG CTCAATTCGG CACCGACGTA
TGGTTAGTGC AGGATACCCC TGCAGATGTG ACAAACGGCG TAGCCATTCC ATTCGACAAC
GAAGCCGACG CGCGCGCAGC CTACGAATCG CTAATGGCCA ATATCGGCAA CGCGTCAGCC
GCGTTAGACT TAACGGATAT TGAAATAAAA GATAGCGATA CAGGCCTCGC TGCCGACTGG
GTAGACACAG CCCACTTTGC CGAAATTTAT ATTCGCGGCT ATCAAGATTC AGACGGCAAC
GGCATAGGTG ATATTCAAGG CTTAATTTCG CGGTTAGATT ATTTAGCCGA GTCTGGCATA
AACGGCATTT GGTTAATGCC AGCCATGGAA AGCTCGGATA ACGATCACGG CTATGCCACA
TCGGATTACC GCGCCATAGA AAGCGACTAC GGCACCATGC AAGATTTTCA ACAACTGCTT
GATGAAGCCC ATGCGCGTAA CATTGCCATA GTAATGGATT ATGTGATGAA CCATTCGAGC
AATGCCAACC CCTTGTTCCA AGATGCACTA AGCTCACCCA CTAACAGCAA GCGCGATTGG
TATATTATTC GCGACGATAA ATTAGAAGGC TGGAACACAT GGGGCAGCGA CCCGTGGAAA
AGCAACGCCA ACGGCTATTA CTATGCAGCG TTCTCTTCGC AAATGCCCGA TTTTAATTTG
CGCAACCCAG ATGTAATTCG CTTTCACCAA AACAACCTGC GCTTTTGGTT AAACATGGGC
GTGGATGGTT TTCGCTTCGA TGCCGTTGGT GTATTAGTCG AAAATGGTAA AGATGCCTGG
GAAGACCAAG ACGATAACCA CCCCGTTATT AACGCCATGA AAACAACCAT AGAAGCCTAT
CAAAAGCGCT ACATAGTGTG CGAGTCCCCC ACCGGCTACG CAGCCTTTGC TCAGCAAAAC
TCCTGTGGCC GCGCATTTAA TTTTTCTGCA GGGCACGGTA TTTTACGCAG CGTAAAACAG
GGCAAGCTAG ATGCAGAATT TGTTGAGCAA CTTAATGCCA GCAATATAGA CGCTATGCCA
CTTATTTTGG CCAACCACGA TGCCTTTGCT GGCATTCGCG TGTGGGATCA ACTTAACGGT
AACAAAACAC ACTATAAACT GGCTGCTGCC AGCTATTTAT TGGCTTCGCG CAACCCATTT
ACTTACTATG GCGAGGAGAT AGGCTTGGCA GGCGCTGCGA ATTTATCCGG CGATTGGAGT
ATTCGCACCC CAATGAGCTG GAACAACGAC CCACAAAATG CAGGTTTTAG CACGGCACAA
CCCTTTAGGG AGTTGTCTGC CAATGTTATG ACCCAAAATG TAGAAGCACA ATTAGGTAAA
ACCGATTCAC TATTAGCCTA TTACCGCAGC ATCTACGATC TTCGCAATGC GCACCCAGTA
ATAGCGAACG GTAATTTAAA TGTGCAGGGG CAAGCTAACG ATAACGCACT GGTTTTGGTG
CGCACCAGCG ACGACGCACA AGCAGTTATT CTATTTAATT ACAGTGCACA AGCGACAAGT
AAAAGTGTTA GCGGGTTAAC CGCCAGTGCA AATTACAGTG GCGCATTAGG AGCAAGTAAT
AACGTTAGTG CTAATGCAAG CGGTACAGCA ACAGTAACCA TACCTGCGCA AACTGCCGTG
GTTTATATTC GCCAGTAA
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| Protein sequence | MRTQNATITR LVLFLSLSLA ISACNGNGPK QNTISEQTPP ADQTPAQPDD TAGADTEGTE
DPKETPDTEN NSPTVRIHYL NSNQAYDNWG LHLWGDAIAS STATNWTSPF ALTRAENDYG
LYEVPLADPN GTFNFIMHFG DFKNPAYDFS IIPAQFGTDV WLVQDTPADV TNGVAIPFDN
EADARAAYES LMANIGNASA ALDLTDIEIK DSDTGLAADW VDTAHFAEIY IRGYQDSDGN
GIGDIQGLIS RLDYLAESGI NGIWLMPAME SSDNDHGYAT SDYRAIESDY GTMQDFQQLL
DEAHARNIAI VMDYVMNHSS NANPLFQDAL SSPTNSKRDW YIIRDDKLEG WNTWGSDPWK
SNANGYYYAA FSSQMPDFNL RNPDVIRFHQ NNLRFWLNMG VDGFRFDAVG VLVENGKDAW
EDQDDNHPVI NAMKTTIEAY QKRYIVCESP TGYAAFAQQN SCGRAFNFSA GHGILRSVKQ
GKLDAEFVEQ LNASNIDAMP LILANHDAFA GIRVWDQLNG NKTHYKLAAA SYLLASRNPF
TYYGEEIGLA GAANLSGDWS IRTPMSWNND PQNAGFSTAQ PFRELSANVM TQNVEAQLGK
TDSLLAYYRS IYDLRNAHPV IANGNLNVQG QANDNALVLV RTSDDAQAVI LFNYSAQATS
KSVSGLTASA NYSGALGASN NVSANASGTA TVTIPAQTAV VYIRQ
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