| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0586 |
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| Symbol | |
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| ID | 3964993 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 724500 |
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| End bp | 725645 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637919649 |
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| Product | OmpA domain-containing protein |
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| Protein accession | YP_526062 |
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| Protein GI | 90020235 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0000977039 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0156715 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACAAATA AACTTAAATT GGCCAGTTCA ATAGCCGTAT TAGTGTCGTC GTTAAGTGCA
GGCGTTAGCT TCGCCGACGA AGGTGATAAA AGTATATTTG TAACTACAGG AAAGTACTTT
TACGATAACG ACTTATCTAT TGACGATGCA ACCCCACTCA CTTTAGGTGC GGGTTACGAC
TTTTCTGATA AGTGGGGCGG AGAGCTTTCT TACACCTACT TAAACAGTGA AATAGAAAAT
AGCAATGTTG ATGTAACAAC TAAGCACTTG CTGTTAGATG GTTTGTATTA CCTAGGCGAC
GCAAAAGGCG ATTGGAAACC TTATTTGGTG TCGGGTATTG GCGGCCGCAA TGTGGATGTA
GACGGTTTCG GCGATAGCTC CAGCACATTT GTAAATGCGG GCGTGGGTAT AAAAGGTTTA
CTTGCCGAAA ACTTTCAAGT GCGTGGCGAT GTGCGTGCCC TGCACGACTT AGATGATAGC
TTTAACGATG TAGGTGTAAA TGTTGGTTTG GCCTATGTGT TTGGCGGTAA AGCTAAAGCA
AGTAAACCTA CTGTAAAGCC GGCAGCTACA ACACCAGCCA AGCCCATGGA TAGTGACAAC
GACGGCGTAG CCAATACTTT GGATGCTTGC CCAGCAACGC CCGCTAATGT GAAAGTAGAT
GCAAAAGGCT GTGCCTTAGA TAGCGATAAC GATGGCGTAG CCGATTATCA AGATAGTTGT
GCCAATACAG CGGCTACCCA TAAAGTAGAT GCCAAAGGCT GCTCACTTTC ATTAACCGAA
ACAGTTGCCA TTAATTTGAG CATTCAATTC GACAACAATA GTGCGGTTGT AAAAGAAAGC
TATTACGCGG AAGTAAAACG CGTGGCAGAT TTTATGAACC AATATGCGAA CACTCAGGTG
AGCGTAGAGG GTTATACCGA CGATCGCGGT AGTGCGGCCT ACAATAAACA ACTTTCACAA
AAGCGTGCAG ATGCGGTGAA AGCGACACTA GTAAGCCAAT TCAATATTGA TGCAGCCCGT
GTAACTGCGA CAGGCTTCGG TGAAATAAAC CCCATCGACA CCAACGATAC CGCCGCTGGC
CGTGCCGCCA ACCGCCGTGT GGTTGCTAAT GTATCATCTG AGGTTGAGAA AGCAGTTACT
AAGTAA
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| Protein sequence | MTNKLKLASS IAVLVSSLSA GVSFADEGDK SIFVTTGKYF YDNDLSIDDA TPLTLGAGYD
FSDKWGGELS YTYLNSEIEN SNVDVTTKHL LLDGLYYLGD AKGDWKPYLV SGIGGRNVDV
DGFGDSSSTF VNAGVGIKGL LAENFQVRGD VRALHDLDDS FNDVGVNVGL AYVFGGKAKA
SKPTVKPAAT TPAKPMDSDN DGVANTLDAC PATPANVKVD AKGCALDSDN DGVADYQDSC
ANTAATHKVD AKGCSLSLTE TVAINLSIQF DNNSAVVKES YYAEVKRVAD FMNQYANTQV
SVEGYTDDRG SAAYNKQLSQ KRADAVKATL VSQFNIDAAR VTATGFGEIN PIDTNDTAAG
RAANRRVVAN VSSEVEKAVT K
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