| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0585 |
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| Symbol | |
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| ID | 3964992 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 723554 |
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| End bp | 724387 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637919648 |
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| Product | putative small-conductance mechanosensitive channel |
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| Protein accession | YP_526061 |
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| Protein GI | 90020234 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0000000591532 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0145572 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATATTG ATATTCAAAA AGTTAGCGAC CAAGCCACGG GTTACATTAT GGTTTACGGT
ACTCAAATTC TAATGGCGCT GCTTATTTTT ATAATAGGTA AGTGGGTTGT GGGTGTTGTG
AGTCGTGCAG TAGGCAAAGC GTTGTCTAAT CGTAAAGTAG ACCCAACAAT TGCTAAATTT
ATTACCAATA TTATTTACTA CTTGATGATG GCGTTTGTAT TTATTGCCGC ATTGGGTCAG
TTAGGTGTTC AAACAGCTTC AATCGTAGCC ATTATGGGTG CTGCAGGTTT GGCTGTGGGT
TTGGCGCTGC AGGGTTCGCT TGCCAATTTT GCAGCTGGTG TACTGATGAT AGCGTTTAGG
CCCTGTCGTG TTGGGGACTT TGTAGAAGCC GGTGGCGCTT CGGGTGTGGT AAAAGAAATA
TCTATTTTTT CTACCATACT GCTAACGCCC GATAACAAAA CTGTGATTAT TTCTAACGCG
AATGTAATGG GCGGCAACAT CGTTAACTAT TCAATGCAGG CGAAGCGCCG CGTAGATTTG
GTTGTAGGGG TTAGCTATAG CTCGGATTTA GCCGTAGTAA AAGATCAGCT ACATGAAATA
GTCGCCAACG AAAGTGCTGT GCTTGTTGGT GAAGAGGTTA CCGTTGCCGT ATCTGAATTG
GCGGCATCAA GCGTAAATTT TGTTGTGCGC TGCTGGGTGA ATACCCCTGA CTACTGGCCC
ACCTACTTTG CACTTACCGA AAAAGTAAAA ATTACATTCG ATAAAAAAGG TATTGAAATT
CCGTTTAATC AAATGGATGT AAACATTAAC TACACGCCAG AGGCAAATGC GTGA
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| Protein sequence | MNIDIQKVSD QATGYIMVYG TQILMALLIF IIGKWVVGVV SRAVGKALSN RKVDPTIAKF
ITNIIYYLMM AFVFIAALGQ LGVQTASIVA IMGAAGLAVG LALQGSLANF AAGVLMIAFR
PCRVGDFVEA GGASGVVKEI SIFSTILLTP DNKTVIISNA NVMGGNIVNY SMQAKRRVDL
VVGVSYSSDL AVVKDQLHEI VANESAVLVG EEVTVAVSEL AASSVNFVVR CWVNTPDYWP
TYFALTEKVK ITFDKKGIEI PFNQMDVNIN YTPEANA
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