| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0583 |
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| Symbol | |
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| ID | 3964990 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 722139 |
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| End bp | 722834 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637919646 |
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| Product | response regulator receiver domain-containing protein |
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| Protein accession | YP_526059 |
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| Protein GI | 90020232 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000000000029507 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0148942 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGAACATTG TGCTTTTAGA GGATGACCCA CAACAGGCAG AGCTTGTAAC GCAATGGCTT
AGCGCAGACC CACTGTTTAA TGTGACCCAT TACGAAAACG TAAAATCGTT TTTAGAAGGC
TGCCGGGCCA ATGTGTTTGA TGTGGCCATA ATGGACTGGG AACTGCCAGA CCAAACAGGC
CTAGAGGCGC TTAAGCACCT GCGCACACGC GATAAACACG ACTTTCCAGT TATATTTACC
ACCCAGCGCG ACTCGGAAGA AGATATAGTA GAAGCGCTTA ATTCTGGCGC CGACGACTAC
CTAGTGAAGC CCCTGCGCAA AGCCGAGCTG CTAGCAAGGG TAAACGTTGC CCGCCGCCGA
TTGGGGTTGG CATCTGCATC CACCACCCTT ACCCTTGGTG ATATTTTGGT AGATACCCAA
GCGCGTACAA TTACTAAACA GGGCGAACAG GTGAAAGTTA CCCAAAAAGA CTTCGACGTA
ACCGTGCACC TGTTAAGTAA TGTAGGTAAA GTATTGTCTC GCGAGTATCT ACTTAAAGCC
GTATGGGGCG TGAGCGCCGA CTTGAATACC CGTACTGTAG ATATGCACGT TAGCCGCGTA
CGCCGCAGCC TAGGCATCAA CCCCGATATG GGCTATTGCA TAACCACTAT TTACCAGCAC
GGCTACCGTC TAGAAAAAAT TAGCAACGAA ACGTAA
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| Protein sequence | MNIVLLEDDP QQAELVTQWL SADPLFNVTH YENVKSFLEG CRANVFDVAI MDWELPDQTG
LEALKHLRTR DKHDFPVIFT TQRDSEEDIV EALNSGADDY LVKPLRKAEL LARVNVARRR
LGLASASTTL TLGDILVDTQ ARTITKQGEQ VKVTQKDFDV TVHLLSNVGK VLSREYLLKA
VWGVSADLNT RTVDMHVSRV RRSLGINPDM GYCITTIYQH GYRLEKISNE T
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