Gene Sde_0582 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_0582 
Symbol 
ID3964989 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp720722 
End bp722113 
Gene Length1392 bp 
Protein Length463 aa 
Translation table11 
GC content53% 
IMG OID637919645 
Producthypothetical protein 
Protein accessionYP_526058 
Protein GI90020231 
COG category[S] Function unknown 
COG ID[COG4254] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000319564 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0200907 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAAGC CCAGTAAAAT ACACTCACTC GCTATGGTGT TCTGCTTAAC AATTGCCGCG 
TGGAGCCAAA CAGCACTCAG CGCTGACTGG CTATATACCG TGCGCCCAGG CGACACCTTT
TGGGACCTGT GCCTTAAATA CACAAACAAA AGCAACTGCT GGCAGGAGCT GCCCGACCTG
AACCAGGTAA AACGTACCCG CGAACTGCCG CCAGGCTACG TTATCCGCAT CCCCGTCAGC
TGGTTGAAAC AAGCGCCAGC ACCGGTGACT ATCGAACACC TTTCTGGCGA TGTATTCTTG
GCCGCGCAAG CAACCGCGCC TCACACACCC GCCATAAACA GCGCTGCCAA CACGCCAAAA
GCTAAACCAC TTAGCAGTGG CGAAAAACTG AGCATTGGCA GCACCGTGTA TACCGAAAAC
GGCTATGCCA GCCTGCGCTT CGCCGACGGC AGCACCCTTA TGGTTATGCC CTACTCATCG
GTAGCGCTAG ATGCCTTTAC CACCCACGAT GGCGAAGCCA TTGTAGATAG CCGTATGCGC
CTGCTAAAAG GCACGGTAAA AGCCAAGGTT AAGAAGCGCC AGCCGCAAAC CCGCTTTAGT
ATTACCACGC CCGATGCAGT TGCAGCCGTA CGCGGCACCG AGTTCCAAGT AAGTTCGAGC
GACGACCAAG CAGCCCCCAC GCGTATAGAA GTATTTGAAG GCCTGGTTGG CGTTGGTAAC
GACAAATCAC AGCAAGAAGT ACCCGCAGGC TTTGGTATTA GTGCAAGTAA AGATAAAGCG
CTTGCGGCCC CCAAAGCGCT GCTAACCGCC CCTGTAATCA CGCCCCCTCC GGCTGCGGTT
ATTCAACCTT ATACGCTTGA ATGGCAAGCT TTAGAGCAAG CCAGCAACTA TGAGGTTCAT
ATAAATAGCC ACGACGAAAC CAATGCACTA CAACAGCACG CAACGGTTGC CACAACAGCA
ATGGAAATAA ACAACCTCGC CATAGGCTGC TACACCGTAA ATGTAAGCGG TGTAGATGCC
GAGCAGTTTC AAGGCTTAGC CGCACAGCAA AAACTTTGCA CCGCGCCGAA TGTTGGCACC
CCCGTGCTGG CTAAAACCGG CTTGCAAAAG GCAAAGGGCA ACAACAACCT AACTTGGGCC
GCTCCCGAAG GCGCCCAAAG CTACGAGGTG CAATTTGCTA GCGATGCCGA GTTCAGCCAC
ATAACCAATG AAACAACAAC TAACACACCC ACAATAGCGC TAACCACCAA CAAAAAAGTC
TTTATTCGCG TGCGCGCGAT TGGCGAGGCA GGCCAAGCCA GCAGCTATTC AAATGCTTTG
CCTTACCAGC CCAAAAACAA AGACTGGCAA GCCATTTTAT TTATAGGAAT CGCGTTCATT
GCTGGGCTTT AA
 
Protein sequence
MTKPSKIHSL AMVFCLTIAA WSQTALSADW LYTVRPGDTF WDLCLKYTNK SNCWQELPDL 
NQVKRTRELP PGYVIRIPVS WLKQAPAPVT IEHLSGDVFL AAQATAPHTP AINSAANTPK
AKPLSSGEKL SIGSTVYTEN GYASLRFADG STLMVMPYSS VALDAFTTHD GEAIVDSRMR
LLKGTVKAKV KKRQPQTRFS ITTPDAVAAV RGTEFQVSSS DDQAAPTRIE VFEGLVGVGN
DKSQQEVPAG FGISASKDKA LAAPKALLTA PVITPPPAAV IQPYTLEWQA LEQASNYEVH
INSHDETNAL QQHATVATTA MEINNLAIGC YTVNVSGVDA EQFQGLAAQQ KLCTAPNVGT
PVLAKTGLQK AKGNNNLTWA APEGAQSYEV QFASDAEFSH ITNETTTNTP TIALTTNKKV
FIRVRAIGEA GQASSYSNAL PYQPKNKDWQ AILFIGIAFI AGL