| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0579 |
|---|
| Symbol | |
|---|
| ID | 3964986 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | + |
|---|
| Start bp | 715208 |
|---|
| End bp | 715708 |
|---|
| Gene Length | 501 bp |
|---|
| Protein Length | 166 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637919642 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_526055 |
|---|
| Protein GI | 90020228 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3812] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 52 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0345367 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGGCAA GTGCACCCAA TATTTTTATC TATTATTTAG ACCGTCTCGC GTTTATTTTA
CAAAAAATAG ACGTAATGGC TGGCGACGAG ACATTGCAAG CGCGTTTAAC CGACGACATG
CTGCCGCTAA TAAATCATGT GCGGGCCTGT GCCAATTTTA GCCTTCGCGG GTGCTGTCCG
CTAATAGGGC AGCCGGCAGT TAGTTTCGAA AACGAAATAA ATAGTTTTGA TGGTTTGCAG
CAACAAATAG AGCAAACTAT TGCGTATCTC AACTCGCTAG TTATTACCGA AGCGAATTTG
CCTAAAAGTG TGCAGGATAA AGCCGGCTTC GCAACGGTTA CGCTCGGGCC TTACGAGTAC
CTTTTCCAAT ATATCTTCCC TAATTTTTAT TTTCACCTGA ATATGGTTTA CGCCATTGCT
CGCCAACAAG GTGTGCCGCT AAGTAAGCAA GACTACGATG CATACCATAA ATACCCCACG
GGGTTTTCTT TCGAACGCTA A
|
|---|
| Protein sequence | MLASAPNIFI YYLDRLAFIL QKIDVMAGDE TLQARLTDDM LPLINHVRAC ANFSLRGCCP
LIGQPAVSFE NEINSFDGLQ QQIEQTIAYL NSLVITEANL PKSVQDKAGF ATVTLGPYEY
LFQYIFPNFY FHLNMVYAIA RQQGVPLSKQ DYDAYHKYPT GFSFER
|
|---|
| |