Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_0569 |
Symbol | |
ID | 3964860 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 703296 |
End bp | 705641 |
Gene Length | 2346 bp |
Protein Length | 781 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637919632 |
Product | hypothetical protein |
Protein accession | YP_526045 |
Protein GI | 90020218 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.220084 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTAATTA ACAAAGCGAG AGGTCGCTTA GCTGCAGCAA TGTTAGCCAC AGCAGCCTCA GCTTGGGGTA GCACGGCTCT AGCCGAGTGC AGCTATCAAG TCACAAATAA TTGGGGCAGC GGATTTACTG CCGCCATTCG CATCACTAAT ACCCAAACGA GTAGTATTAA TGACTGGCAA GTTAGCTGGA CGTACGAAAA TAATACACTT GTAAATGCTT GGAACGCGAA TGTTAGCGGC AATTACACCG CTACAAACAT GGGCTGGAAT GGCTCACTTA CCTCGGGCCA ATCTGTCGAG TTTGGCCTGC AAGGCACCAC AACTGGCGGT GTGGTTGAAA TCCCCCTTTT AACCGGTAAT GTGTGCAACT CAAATACAAG TAGTAGCTCT TCTAGTAGTA CAAGTTCAGC CTCAAGTTCA AGTTCGAGTT CCGGCGCTGC CGCAGTAAAT CTCGCTGGTA TAGCCAATGC GAGCACTTCC TATGTTTCTG CATGGGAAAC ATTGGCAGCA GTGAATGATG GTAACACCCC GGCCAATTCC AACGACAAGT CCAACGGAGC TTACGGCAAC TGGAACAATC CAAATTCGAT ACAGTGGGTA CAGTACGATT GGCCACAAAA CTATACGTTA TCCTCAACGC AAATATATTG GTTTGATGAT AATGGCGGCG TACTGGTACC CGATGTTGCT TACATTGAAT ATTGGAGCAA TGGCACATGG GTAAAAGTAG GTGATGTACC GCGGCAAGAA AATACATTTA ACACGCTAAA TTTAAACAAT ATTGTTACAA ACCGCCTACG TGTTTCTATA AGCAACACAT TGCAATCTAC AGGCATACTG GAGTGGCGCG TAGAGGGAAC AGAGCCAAGC GGCAGCTCAT CTAGCAGCAG CTCAAGCTCA TCATCCAGCT CAACGTCTAG TAGTAGTGGC GGACCAGAAC AGTGTGATGC GTATGTGTGG CCCGAATACG AGCCGAATTT AAATTACGAC TTTAGACAGG ACTACGCAGA TATAAACCCC GAAGAATTTG AGGTATTTTT AGGTTGCGAC CCAAGCCAAG TTGCAGGTGT TAAAACTTCT GGCTGGTACG CGTTTATTTG GGGGCATAAT CGCAACCCCG CAATTACCGA TGAAGATATA GATAGAGTAT TGGCCAATTT AAATGAAGAT ATGGCATACG CTCGCGGCGA AATGGGCTGG CCACCCGATA AGCTTCCTCA GGAAGGCTAC TACAGCAATG TGTATTTGTA CGGCTCTGGT TTATGTACCG ATAACGCAGC CAATACCGAG CGAGGTGGCT GGCAAAGTAG CATTGCCGGC TACCCCATGG TACTGCTTTC GTATTACCCA GTAATAACAC CTAGCGAGCG CGGTGGTATA ACCCACGAAG CTATCCACAC TATTATGGCT TCGATGGGAA ACAAAGCTGC ATGGTTTAAC GAAGGCGGCA ACACTTGGCT ACAAATGAAT ATGGAGGCAT CTCGCGTTGG GGATTATGGC GTTGGCTTTT TAGATGGTGC CCCCTTTTTA GCGCCGCACA TGCCAATCGA AAATTACAGT GGTTGGCTAC AAGATGGCTC CTTCGGTGGG CCGAATGCTG AAGGCGTACA CCGGGAATTA AATGGTCAGC AAATAGCAAC TTGGCGAGAT TACTTAGGCG GCCATCAATA CAACTCTGTG TTTTCTCACT TTTTAGCGCA ATATGTTTCT AGCGGTGCAA ATGCGTGGAT ATGGAAAAAC GGGCCATATA ACCATATTCT CGCCTCGCTA GCAGCGGGCT TGGGCGACGA CCAAACTCGC CACTTAATTA TGCAATACCG CGCACGGCAA GCAATGGTTG ATTTTGGCCC TTGGACGAAT GGATTTAAAC AACCAATCAA TAACAATTGG CAACGCACCA TTGGTGCAGA AGAAACCGCT GCTGGCAAAT GGATGGAGCC TGAACCCCAT CAATTAACGT TTTATGCTGC AACAAGCCAG GAAGGTAATA CTTTGATACC AGCACAAAAT ACATTGCCGG GCTGGTCTGG TGCCAATCAA ATACCATTAC AAGTAACCGG CAACAAAGTG CGTGTTGATT TTGAACCATT CGGCAACAAT ATGCGCTTGC AATTAGCCTA TCGCGCACAA GACGGTTCAG CGGTATACAG CCAGCCTATA GAAAGTGGCG AAGCGTGCTT AACACTAGAA AAAACACCCA AAAATGGCGT AGTGGTGGCA ATTGTATCCA ACACCGATTA CACCTACGCA GGGGATGAAA CTCGCAAACA AAAATACGAT TACAGAGTGC ATATTCAAGA AGGCGTAAGC GGTACGGCAT CACTTTATAG CAAGCACTAT GAATAG
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Protein sequence | MLINKARGRL AAAMLATAAS AWGSTALAEC SYQVTNNWGS GFTAAIRITN TQTSSINDWQ VSWTYENNTL VNAWNANVSG NYTATNMGWN GSLTSGQSVE FGLQGTTTGG VVEIPLLTGN VCNSNTSSSS SSSTSSASSS SSSSGAAAVN LAGIANASTS YVSAWETLAA VNDGNTPANS NDKSNGAYGN WNNPNSIQWV QYDWPQNYTL SSTQIYWFDD NGGVLVPDVA YIEYWSNGTW VKVGDVPRQE NTFNTLNLNN IVTNRLRVSI SNTLQSTGIL EWRVEGTEPS GSSSSSSSSS SSSSTSSSSG GPEQCDAYVW PEYEPNLNYD FRQDYADINP EEFEVFLGCD PSQVAGVKTS GWYAFIWGHN RNPAITDEDI DRVLANLNED MAYARGEMGW PPDKLPQEGY YSNVYLYGSG LCTDNAANTE RGGWQSSIAG YPMVLLSYYP VITPSERGGI THEAIHTIMA SMGNKAAWFN EGGNTWLQMN MEASRVGDYG VGFLDGAPFL APHMPIENYS GWLQDGSFGG PNAEGVHREL NGQQIATWRD YLGGHQYNSV FSHFLAQYVS SGANAWIWKN GPYNHILASL AAGLGDDQTR HLIMQYRARQ AMVDFGPWTN GFKQPINNNW QRTIGAEETA AGKWMEPEPH QLTFYAATSQ EGNTLIPAQN TLPGWSGANQ IPLQVTGNKV RVDFEPFGNN MRLQLAYRAQ DGSAVYSQPI ESGEACLTLE KTPKNGVVVA IVSNTDYTYA GDETRKQKYD YRVHIQEGVS GTASLYSKHY E
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