| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0567 |
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| Symbol | |
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| ID | 3964858 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 700283 |
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| End bp | 702373 |
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| Gene Length | 2091 bp |
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| Protein Length | 696 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637919630 |
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| Product | glucan 1,4-alpha-glucosidase |
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| Protein accession | YP_526043 |
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| Protein GI | 90020216 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4232] Thiol:disulfide interchange protein
[COG4233] Uncharacterized protein predicted to be involved in C-type cytochrome biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0442457 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.317311 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGTAC CCCCGTGCTT TAAACGTTTT TGCGGGCTTT TAAAAGCATT CAAGGCCGTA
CGAGTATTGT GTGTAGTGGT GTTTGCCATA TGTCTAGCCG CGCAGGCAGG CGCGCAGAGC
ACCGCCTTTG GTGACCATGT AAAGGTGCGT TGGTTAGCAC CAGATTCCCT AATAGCTGGC
CAGCAAGAGG TTATTGGCTT TTATTTTGAG GTTGACCTCG GCTGGCACGT TTACTGGCAC
AACCCCGGCG ATTCGGGGGC TGCGCCTCGC TTTGATATTC AAGTGCAGGG GGCAACCCTT
GGCGAAGTGA TGTGGCCGTA TCCTACTCGC TTGCCTATCG AACACCTTAC CAATTTGGGC
TATGAAAGTA ATGTCGCCTA TTTGTTGCCT ATCACTGCCG ATCTTCAAAC CAGCGAAGTT
GTATTAAACG TGAGTTTAGA GTGGCTGGTA TGCAAAGTGG ATTGTATACC GGGGTTTGGC
GAAATGAGTT TACGTTTGCC AATAACGAAC CAAAGCCTAT GGCTAGCGCC AGATTTAGCT
TTGCGCGATG GCTATTTAGC GCTCGTACCA CAGCAAACTA ACAGCCCATG GCAAGCCGTA
AAGGCGCAGG CGGTTGGCGA TACCCAGTTG CAGCTTACGT TACATGCAAA CTCTACGCGG
CTAGCGCAAG GTGACTTTAA TTCAGTAAGC GTATTCCCCG TCGACGGCGA AGTGCTAACT
GCCACAAAAC CACAAATTAA AAGTAATGCC GCGGGGCTAG AGCTTACCTT TAATAGGGTG
CCGGGTGCAG CGTTGCCCAC CGCCACAGAT TTTGTTGTGG TTGATGGCAA TCGCGCGTGG
CGTTTGAATG ATATTGCATT AGTTAATCAA GCGGTATTGT TGCCAGCAAA TAGCCAGTCG
CAAACCCAGC CGCAATCATT TTGGTTGTTG CTGGGTGCGG CTTTTTTAGG TGGGGTAATT
TTAAATTTAA TGCCGTGTGT TTTCCCTGTA CTGTCCATTA AATTATTTGG CTTGGTACAG
CAAAGCTCTG CGCATCGAGC GAAAGAAGGC TTTGTGTATG CCGCGGGTGT ACTGTGTACC
TTTACTTTAC TCGGGGCGGT GTTGTTGGGC TTGCGCGCAG GTGGGGCCGC ACTGGGGTGG
GGGTTTCAAC TGCAATCGCC TGCGGTAATA CTTGTTTTAA TCACGTTATT TTGGCTAATG
GCATTGTCGT TTAGTGGCGT CTTCGAGTTT GGCCATAGGT TGGTAACACT TGCCGGTTCG
CATCGAGGCG GTGCGTTTAT TACCGGTGTG TTAGCCGTAT TTGTAGCAAC CCCCTGTACA
GGCCCGTTTA TGGGTGCGGC CCTTGGTGCT GCAGTGGTAT TGCCGCCGCT GTCAGCCATT
ACCTTGTTTG TGGGTTTAGG TGCTGGTTTG GCAGCGCCTT TTGTGGCGCT ATGCTTATAC
TCGCCATTGC TGCACAAGTT GCCCAAGCCT GGCCCTTGGA TGGAAACCTT ACGTCAATTT
TTGGCATTTC CGTTATACGC TACCGTTATT TGGCTTTTAT GGGTATTAGG TCGATTAGTT
GGCGACATTG GCTGGCTAGT TGGTGCTAGT CTTATGCTTA GCTTTGTTGT AGCTATTTGG
CTCGCATCTA CATTGCAGTG GGGCAAACTT GGCCGCAGCG TAATATGTTT AGGCGCTGTT
GTTGCTTTTG TATTTTCACT TAGTCTATTG GCTATACCCT CAGGGAATAA AAACTCTGGT
AGTGAAACAT CACAATGGAA TAAGTTTGAT AGCCAAGCCA TAGCGCAAGC GCGCGCACAG
GGGCGGGCCG TTTTTATAGA TTACACCGCG GCATGGTGCA TAACTTGCCA AGTAAACAAA
AAGCTAGTGC TCGATACGCA ACCTATACAG GATAGTTTTA AGAAAAATAA TGTGTACTTA
GTTCGGGCCG ACTGGACCCA CAGAGACGAT GCTATAACCC AGTCTTTGGC ACAGCTGGGG
CGCAACTCCG TGCCTGTATA CGCATGGTAT GGCAAGGGCG CAGATGAAGT TGTATTGCTG
TCGCAAATAT TAACAGCAGG CAGTATAGAC GCGCTTTTCG AGCAGAAGTG A
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| Protein sequence | MFVPPCFKRF CGLLKAFKAV RVLCVVVFAI CLAAQAGAQS TAFGDHVKVR WLAPDSLIAG
QQEVIGFYFE VDLGWHVYWH NPGDSGAAPR FDIQVQGATL GEVMWPYPTR LPIEHLTNLG
YESNVAYLLP ITADLQTSEV VLNVSLEWLV CKVDCIPGFG EMSLRLPITN QSLWLAPDLA
LRDGYLALVP QQTNSPWQAV KAQAVGDTQL QLTLHANSTR LAQGDFNSVS VFPVDGEVLT
ATKPQIKSNA AGLELTFNRV PGAALPTATD FVVVDGNRAW RLNDIALVNQ AVLLPANSQS
QTQPQSFWLL LGAAFLGGVI LNLMPCVFPV LSIKLFGLVQ QSSAHRAKEG FVYAAGVLCT
FTLLGAVLLG LRAGGAALGW GFQLQSPAVI LVLITLFWLM ALSFSGVFEF GHRLVTLAGS
HRGGAFITGV LAVFVATPCT GPFMGAALGA AVVLPPLSAI TLFVGLGAGL AAPFVALCLY
SPLLHKLPKP GPWMETLRQF LAFPLYATVI WLLWVLGRLV GDIGWLVGAS LMLSFVVAIW
LASTLQWGKL GRSVICLGAV VAFVFSLSLL AIPSGNKNSG SETSQWNKFD SQAIAQARAQ
GRAVFIDYTA AWCITCQVNK KLVLDTQPIQ DSFKKNNVYL VRADWTHRDD AITQSLAQLG
RNSVPVYAWY GKGADEVVLL SQILTAGSID ALFEQK
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