| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0565 |
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| Symbol | |
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| ID | 3964856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 697764 |
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| End bp | 699200 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637919628 |
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| Product | signal peptide and transmembrane prediction |
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| Protein accession | YP_526041 |
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| Protein GI | 90020214 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000000390373 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.415179 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACACAAT TACGCCTACT GCTAGTATGC CTAGCCTTAC TATTTGTTTC TCAAACTAGT
ATGGCCTATA ACGAGCAGAA ACATAGGGTA ATTGTACTAA CAGATATAGA GGCAGACCCA
GACGACACTC AATCATTGGT TAGGCTTTTT TTGTATGCCA ATCAAATAGA TATTCAAGGC
TTAATCGCTA CCACTTCGTG CTGGCAACAA AATGCGATAC ACCCAGAATC TATAGCAAAG
GTAATTGGCG CTTACGCCAA AGTTCATTCG AACCTGAGCA AACACGAAAA AGGCTACCCC
AGCGCAAAAA CACTCAACAA ATTAATTAAA CGCGGAGCGC CTACATACGG CATGACAGGT
GTTGGCAATG GAAAGGACAC CGAGGGCTCG AACTGGATTA TTAAAACACT TGAACAAGAT
GATGAAAGAC CGCTCTGGAT ATCCGTTTGG GGCGGCGCCA ATACTCTTGC GCAAGCATTA
CACACTATTC GAGCCACCAA GAGTGAAGCA GAAGCACACG CACTTGTATC AAAGCTGCGG
GTGTACACCA TTTCGGATCA GGACGACAGC GGCATTTGGA TTCGCAATAA TTTCCCCGAT
TTATTTTACA TTGTAACGCC AGGTGACGAT TACGGTAGCG CAACATGGAC AGGCATTAAC
ACCTATATTG AAGGCATTGA TAATTCAGAG ATTAGCAACA CATGGCTTGC GAATAATATT
CAGCAAAACC ACGGCCCACT CGGCGCAATG TATCCAGATG TAGCTTGGGG TGTAGAAGGT
GACACACCCG CCTTTTTATC TCTAATTCCA AACGGCTTAA ATAACCCTGA GCACCCTAAC
TGGGGCGGCT GGGGTGGCCG CTACGAACTT TATAAACCTG ATTTTGCCCT AACTAAAGAA
GGTGGCTCTA TTGTAGAAAT TGCCCCAGAA ACACGTGATA TTTGGACAAA CGCCATAGAC
ACGTACACCC CTCACACCTA CCGCGAATAC GGTCGCACAT TTAAAGCAGG AGAAAAAAGC
TTTACAGGCT TTAAAGAAAC GCTATGGCGT TGGCGATTAG ATTTTCAAAA TGATTTCGCA
GCGAGAATGG ACTGGACGAT AAAACCTTAT AACCAGGCGA ACCACCCACC GGTACCCGTA
CTTAACCATA CAGATATTTT GACGGTAAAA TCAGGTGAGG GCTTCACGCT GGACGCAAGT
AAATCCTCCG ACCCAGATGG CGATAGCCTA AGCTATTTTT GGTTTAACTA CTCTGAGGCT
GGCTCACTTC AAGAGCCGCA CCCAGTAGGC GGCGCAGACA ACGCCCACGC CATTTATTTA
ACCGCCCCAA CAGTAACCCA AAAAGAAACC TTACACTACA TTCTTAAACT TACCGACAAA
GGCACACCTG CGCTTAGCCG ATATAAACGT ACTATTGTAA ATGTAGTACC TAAATAG
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| Protein sequence | MTQLRLLLVC LALLFVSQTS MAYNEQKHRV IVLTDIEADP DDTQSLVRLF LYANQIDIQG
LIATTSCWQQ NAIHPESIAK VIGAYAKVHS NLSKHEKGYP SAKTLNKLIK RGAPTYGMTG
VGNGKDTEGS NWIIKTLEQD DERPLWISVW GGANTLAQAL HTIRATKSEA EAHALVSKLR
VYTISDQDDS GIWIRNNFPD LFYIVTPGDD YGSATWTGIN TYIEGIDNSE ISNTWLANNI
QQNHGPLGAM YPDVAWGVEG DTPAFLSLIP NGLNNPEHPN WGGWGGRYEL YKPDFALTKE
GGSIVEIAPE TRDIWTNAID TYTPHTYREY GRTFKAGEKS FTGFKETLWR WRLDFQNDFA
ARMDWTIKPY NQANHPPVPV LNHTDILTVK SGEGFTLDAS KSSDPDGDSL SYFWFNYSEA
GSLQEPHPVG GADNAHAIYL TAPTVTQKET LHYILKLTDK GTPALSRYKR TIVNVVPK
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