| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0562 |
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| Symbol | |
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| ID | 3964853 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 692781 |
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| End bp | 695183 |
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| Gene Length | 2403 bp |
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| Protein Length | 800 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637919625 |
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| Product | hypothetical protein |
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| Protein accession | YP_526038 |
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| Protein GI | 90020211 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1033] Predicted exporters of the RND superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.593707 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.20774 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCAGG CTAAAGCGCG TTTAATTTCG CTTGTTTTTT TACTACTTAC TGGGGTTGCA
CTCTGGCAGG CCCAGTATTT TAAAATTGAT GCCTCGGCAG ATACGCTGCT AACCAAGGGC
AATAAACTTT ACTTAATTAC TCAACAAGCA AGCCAAACCT ATAACCCAGA AGAATTTATA
CTTATTGCCT ACAAGCCCGA ATCTAGTGCT ATATTTTCGG AACCTGTACT TACCTTTATA
GACTCTCTCG CCGCAAAAAT ACAAAAAATT GAACGCGTTA AATCTGTACG TAGTGTAGTG
AATGTACCTA TTTTTGCAGG TATGTCGAGC TTTAGCGCAG ATATAGACCC AAATGCCCTT
TCTTGGCAGC AGCAGCGTTT CTCGGAAGAG AAAATGAAGT ATGCGCTTAC CCATCACCCC
CTTTACGAAG ATTTACTTTT TAACAAAGCG CAAACAGCGC TTTCTATGCA GGTTGTGTTC
GAATCTAACA AAGAATTGGA TAAGCTAAAC GGTGAATTGG TAGCTATAGA AACGAAAATG
CTCGAGCGCG AACTCACCGA TGAGGAGCAA GAAAGAGCTG ATGAGCTGCG TAGCCAAAAA
GAAAAAATAG AAGAAAAGCT AAGTGTAAAA CGTAAACAAG AAATAGACCA AATTAGAGAA
ATATTGAAAA ACGCCTCTGC AGACGGTGAG TTTTTTCTAG GCGGTAATAA CCTACTTGCC
TACCAAATGA TTAATATTAT TAAAAACGAC CTAGTAGTGT TTGGTGCAGC TATTTTACTT
ATTGTAAGTG TATTGTTACT TGTATTGTTT AGGCGGCTAA AATGGCTAGT GTTACCACTC
GCCTGTTGTT TTGTTAGTGT GGTGTTTACC TTAGGCTTAC TTGGCGGCTT GGGTATTAAA
GTTACTGTTA TTTCGGCTAA CGTGGTTGCA TTACAAATAA TCCTAACTTT AGCTGTGGTT
ATACATATTA TTGTGCAATA CCAAGAAGAG GTGGCAAAGC TTAAAGGTTC TTCAGAATCG
CTTGACCAGA CGAAAATAGT TACCCGTACT ATTAAAGAAA AGCTTAACCC GTGCTTCTAT
GCTGGCCTAA CCACAGCTAT CGGTTTTGGC TCACTTATTT TTAGCGGTAT TCAACCTGTT
ATTACGTTTG GTTGGATGAT GGTAATAGCG CTTGCCGTTA CGCTACTTGT AAGCTTGGTA
TTGTTTCCAA GTTTGCTAAT TGGTTTTTGT CGCGCAGACA CCAAGCATGT AACGGTAAAG
TGGTTAGATG TATTAATGCA TGGTTTGGCC AGCGCGGTAG ATAAGTTTCC TAGGGGCATT
GTAATCACCA GCATTGTAGT GGCAGCAACA GGCGTTGGCG GTTGCTTTTT ACTCACGGCA
GAAAACAGTT TTTTAAACTA CTTTAAAAGC TCTACCGATG TATCCCGCGA GTTAACCTTT
ATAGATAAAG AATTCGGCGG CAGCACCCCG TTTGATATTC TGCTTACCAT CCCACAATCG
CAGCGCGACC CGCAACTGGT TGTTACCGCA GAGGCGATTC AAACCTTAGA AGCGGTGCAA
GCGAAAATGG CGGAAAAAGA AGCCATTGGC AGCATTACCT CTATTGCCGA CTTTACTCGC
ATGGCATCGG TTGTAAATAA AAAGCCGCTT GTGGAATACG AGCTATCAGC TCTTTATTAC
GCACTGGATA AACAATTAAA AGACGATTTG TTTGGCGCTT ACTTTGCAGA AAATAAAAAC
GAAATGCGTA TTTCTATGCG GGTAATCGAT TCCACACCGG GTTTGAATCG CGAGCAATTG
GTAGAGCAAG TGCATGCCGA TATGGCGGCA GCAGGTGTAG ATAAGGCTAA CTACAAATTA
AGCAGCTTGT TTATTTTGTA CCAAGATATT ATCGCCCGCT TGATGAACTC GCAAATAATG
ACCTTAGCCA TTGTTTATTT AGCCATGGCG GTGGTGTTGG TATTTATTTT TAAATCTATC
AAAGTAGCGT TAATTGCATT GGTGCCCAAT GTCATCACTA CCGCCGCAAT TATGGGGTTT
TTAGGTTTTG TGGGCATACC GCTAGATTTA ATGACTATGA CAATAGCGGC CGTAGCAATG
GGTATTTCTG TGGATGATAC CATTCACTAT GTGCATCGCT TCCAAGAAGA GGTCGCCAAT
AAGTCAGATA ACCCCGTGCG TTCTTCACAC CTTTCGGTGG GGTATGCATT GCTTTACACA
ACTTCAATTA TTGTAATTGG TTTTGTCTCG TTGGTATTTT CAGATTTTGT GCCAAGTATT
TTATTTGGCT TATTAACAAG CTTGGCTATG TTGCTAGCGC TTATAACAGA TATATCCATA
CTGCCGGTAT TATTAAAAAC ATATTGCTCT AAAGCGAAGC CTGCTAAAAC ACAGCCGGCG
TAA
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| Protein sequence | MTQAKARLIS LVFLLLTGVA LWQAQYFKID ASADTLLTKG NKLYLITQQA SQTYNPEEFI
LIAYKPESSA IFSEPVLTFI DSLAAKIQKI ERVKSVRSVV NVPIFAGMSS FSADIDPNAL
SWQQQRFSEE KMKYALTHHP LYEDLLFNKA QTALSMQVVF ESNKELDKLN GELVAIETKM
LERELTDEEQ ERADELRSQK EKIEEKLSVK RKQEIDQIRE ILKNASADGE FFLGGNNLLA
YQMINIIKND LVVFGAAILL IVSVLLLVLF RRLKWLVLPL ACCFVSVVFT LGLLGGLGIK
VTVISANVVA LQIILTLAVV IHIIVQYQEE VAKLKGSSES LDQTKIVTRT IKEKLNPCFY
AGLTTAIGFG SLIFSGIQPV ITFGWMMVIA LAVTLLVSLV LFPSLLIGFC RADTKHVTVK
WLDVLMHGLA SAVDKFPRGI VITSIVVAAT GVGGCFLLTA ENSFLNYFKS STDVSRELTF
IDKEFGGSTP FDILLTIPQS QRDPQLVVTA EAIQTLEAVQ AKMAEKEAIG SITSIADFTR
MASVVNKKPL VEYELSALYY ALDKQLKDDL FGAYFAENKN EMRISMRVID STPGLNREQL
VEQVHADMAA AGVDKANYKL SSLFILYQDI IARLMNSQIM TLAIVYLAMA VVLVFIFKSI
KVALIALVPN VITTAAIMGF LGFVGIPLDL MTMTIAAVAM GISVDDTIHY VHRFQEEVAN
KSDNPVRSSH LSVGYALLYT TSIIVIGFVS LVFSDFVPSI LFGLLTSLAM LLALITDISI
LPVLLKTYCS KAKPAKTQPA
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