| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0557 |
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| Symbol | |
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| ID | 3967900 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 679298 |
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| End bp | 681715 |
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| Gene Length | 2418 bp |
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| Protein Length | 805 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637919620 |
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| Product | hypothetical protein |
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| Protein accession | YP_526033 |
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| Protein GI | 90020206 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000326191 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATCGAG GTAACCAATT AGTGACATAT CTATCTAAAT GTACTCACTT AACAGCCTTA
TTGGCTTTCT TTTTTGTTTC CCAATCGGCC TCGGCGAGCG CCACCGCAAC CGTAACGTGG
GAAACCCCCG ATCAACGTGA AAACGGTGAT TATCTAAACG CAAATGAAAT AGGCGGGTTT
GAACTTGCTT ATCGCCTTAC CAGTGAGCCT GTATATAGCT CAGTAATTGT GGAGCAGGCG
ACAGCTACCC ACTACGAACT CACTAATCTC ACCGACGGTG AGTACGAATT TAAAATTGCC
GCTTTTGATG CCGATGGTTT GTACAGCGAC TTTTCGGACT CCACCATTGC ATTAATAAGC
ACTACCACGT CAGGTAATAC CGATAGCAAC AGTGGTGACT CGAGCAATGG CACTGGCACA
GATAGCAGCA CTGGCGGCGA CAGCGGCACA GATTTAGTTG ATGCTGTTGT TAGCTGGCAA
ATACCTAGCG AGCGCGAAAA TGGTGAAGCT TTAGCTTTAG CTGATATTGG GGGTTACGAG
ATTGCTTACC GCTCTACCGA TGTAAGCGTA TTTCAATCGG TGGTGGTTAA TAGTGCAGAG
CTAACCGAGT ATCAACTTAC CAACCTACAC GCTGGTGAAT ACGAATTTAC AATAGCCGCG
TTTGATAACG ACGGTTTGTA TAGCGATTTT TCTGAGCCAA CTTTTGTTGT GCTTGGCGCC
GATGGCAGCA CAAGTGGTGG CAGCGGTGGT GCTAATGATA CTAATACCGA TACCAACACC
GATACCGACA GTACGGATAC TAATACCGAA TCCAACGGCT CGAACGATAC GGCTAGCGGC
ACAGGTAGTA ATAGCGGTAG TGAAACAGGT GAAAGCGAAA CAACCGAAAC CGGCAACTTG
TACAGCGCAA CGGTTACTTG GCAAACGCCT GCCGAGCGAG AAAACGGTGA GTTTTTATCG
CATGCCGACA TTGGTGGTTA CGAAATTGCG TATCGCTTAA CACAAAGCAA CACCTTTCAA
TCGCTAGTAG TAAACGACAG TTTGCAAACG CAAATGGTGC TTAATAATTT GGTGGCAGGC
GAGTATGAAT TTTCTATAGC CGCTTTTGAT AGCGAAGGTT TGTACAGCGA TTTTTCTGAG
CCTACCTATG CGGTAATTGG TGTTGGGTCT GGTAGCACTG ATTCTGAAAA TACGGGTTCT
ACAAATACGG GTTCTACAAA TACGGGTTCA GAAAACACGG GCTCTACAAA TACAGGTTCA
GAAAATACTA ATAGCGGTAG CGAAACGGGG TCGAACTTGG TTGCTGCAAC TATTCGCTGG
CAGGTGCCAT CGGAGCGTGA GAACGGCGCT TTGTTAGCAA TAGAAGAGCT TGGCGGTTAC
GAGATTGCTT ATCGCAACAC TAACGACCCC GTATTCGAAG CCATTATTGT CACTAACCGC
GAGCAAACTG CTTATGAGCT TGCCAATTTA GTTGCCGGTG AATACGAGTT TAGTATTGCT
GCATTTGATA ACGAAGGCTT ATACAGCGAT TTTTCTGAGC CAACCATTGT TGTATTAGGT
GGTGGCAGCA CTTCGGTTGA TGATGGTGAC GATGTTGCAA ATAACGATTC TGGCAACACA
GGTACTAATA CCGGTACCGG TGGCGACAGC CAAAACGAAA GCAACACTGG CAATGCAGAT
AACACCAGCG AGAGTAACAC CAACGGCCAG CTGCTTAGTG CAACCATTAA CTGGTTAATC
CCAACACATC GTGAAAATGG CGAGCAATTG TTAAACGGTG AAATAGGTGG CTTCGAAGTA
GCGTATCGCA ATACTCAAAG CGGTACTTAC ACATCGCTTA TTGTTGAAGA TGCTACTCAA
GCAAGTTTAG AAATTACCAA CTTAGAAGCC GGTGAGTACG AGTTTATTAT TGCGGCTTTC
GATAGCGAAG GTTTGTACAG CGACTTTTCT GACCCAACCA TCGCGACTAT AGGTGCGGAC
GGCAGTGTTG CTTCATCTTC CGATGATAAC AATACTGAAC AGAACAATAC CGATGTTGCA
AACTCTGGAG ACAATAGCAG CGGTACTGCA GGAAATGGAA CTGATAGTGG TACGAGCGGT
GGAGCAGACG CTACAGGCGG CAGCGACACA GAGCAAACCG GCGGTGCAGT ATTGGTTGCA
ACCATTAGCT GGGAAATTCC CACACAGCGC GAAAATGGCC AAGACCTTTT GCTAAGCGAA
ATTGGCGGCT ACGAAATACT TTACCGCCCA ACCCTTAGCG CAGTGTATGA ATCCATTGTG
GTAGAGGATC AAACGCAAAC GCAAATAGTG CTTAATAACC TACCCTCAGG TGAGTACGAA
TTTGTAATCG CAGCTTTCGA TAGCGACGGT TTGTACAGCG ATTTTTCTGA CCCGACTATT
GCGATGTTAG GGGATTAA
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| Protein sequence | MYRGNQLVTY LSKCTHLTAL LAFFFVSQSA SASATATVTW ETPDQRENGD YLNANEIGGF
ELAYRLTSEP VYSSVIVEQA TATHYELTNL TDGEYEFKIA AFDADGLYSD FSDSTIALIS
TTTSGNTDSN SGDSSNGTGT DSSTGGDSGT DLVDAVVSWQ IPSERENGEA LALADIGGYE
IAYRSTDVSV FQSVVVNSAE LTEYQLTNLH AGEYEFTIAA FDNDGLYSDF SEPTFVVLGA
DGSTSGGSGG ANDTNTDTNT DTDSTDTNTE SNGSNDTASG TGSNSGSETG ESETTETGNL
YSATVTWQTP AERENGEFLS HADIGGYEIA YRLTQSNTFQ SLVVNDSLQT QMVLNNLVAG
EYEFSIAAFD SEGLYSDFSE PTYAVIGVGS GSTDSENTGS TNTGSTNTGS ENTGSTNTGS
ENTNSGSETG SNLVAATIRW QVPSERENGA LLAIEELGGY EIAYRNTNDP VFEAIIVTNR
EQTAYELANL VAGEYEFSIA AFDNEGLYSD FSEPTIVVLG GGSTSVDDGD DVANNDSGNT
GTNTGTGGDS QNESNTGNAD NTSESNTNGQ LLSATINWLI PTHRENGEQL LNGEIGGFEV
AYRNTQSGTY TSLIVEDATQ ASLEITNLEA GEYEFIIAAF DSEGLYSDFS DPTIATIGAD
GSVASSSDDN NTEQNNTDVA NSGDNSSGTA GNGTDSGTSG GADATGGSDT EQTGGAVLVA
TISWEIPTQR ENGQDLLLSE IGGYEILYRP TLSAVYESIV VEDQTQTQIV LNNLPSGEYE
FVIAAFDSDG LYSDFSDPTI AMLGD
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