| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0556 |
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| Symbol | |
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| ID | 3967899 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 676857 |
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| End bp | 678731 |
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| Gene Length | 1875 bp |
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| Protein Length | 624 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637919619 |
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| Product | alpha amylase domain-containing protein |
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| Protein accession | YP_526032 |
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| Protein GI | 90020205 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.120773 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGAA TAATCGCGCT ATGTCTTTTG GCCTGTTGGG TTTGCAGCTG TTCGCAACCA
GAGGTTAACG CGCCTGAAGA GGCCCCCGAG CAAATGCAAG GTAAACCCGT TGTTTATCAA
ATGTTTACCC GCTTATTTGG CAATAAAGTT GAGCTAAATA AGCCTTGGGG CACTAAAGAA
GAAAATGGGG TGGGCAAGTT TGCCGATATA AACGCTCAAG CATTAACAGC AATTAAAGAA
ATGGGCGTAA GCCACGTGTG GTACACCGGT GTGTTACACC ATGCCTTAAT AGCAGATTAC
ACCGAATACG GTTTAACTAA CGACGACCCA GATGTAGTGA AGGGGCGTGC TGGTTCGCCC
TATGCGGTAA AAGATTATTA CAACGTAAAC CCCGATTTAG CCGTTAACCC CGCAAAGCGC
ATGGAAGAAT TTGAGCAACT TATTGCGCGC ACCCATGCCC ACGGCTTAAA AGTAGTTATA
GATATAGTGC CCAATCATGT TGCGCGGGCT TATCAATCCA CTAATGCGCC ACAGGGTGTA
GAAGATTTTG GTGCGAGTGA CGATACTTCG GTGGAGTACG CTCGCGATAA TAATTTTTAT
TATGTTGTTG GTGAGCCATT TAAAGTGCCC TTAGCCGAAA ATGGTTATAA ACCTTTGGGT
GGCGAGGCGC ATCCGTTAAG CGATGGTGAA TTTGATGAAA ACCCCGCTAA ATGGACGGGT
AACGGTTCGC GATTAGCCCA GCCAAAAGCC GATGATTGGT ACGAAACCGT AAAAATAAAT
TACGGTGTGC GGCCCGATGG CAGCAAGGAT TTCCCCGAGT TACCCGAAGA TTATCGCTAC
AAAAATGCCG AGGCCCACTA CCAGTTTTGG CAGGGTAAGA GCGTGCCCAG CTCGTGGGTT
AAGTTTCGTC AAATTGCAGA ATTTTGGATT GAAAAAGGTG TAGATGGGTT TCGTTACGAT
ATGGCCGAAA TGGTGCCGGT GGAATTTTGG AGCTACCTCA ATGCTCATAT TAAACACCAG
CGCGCAGACT TTTTCTTATT GGCAGAAATA TATAACCCCG CTGAATACCG CAACTATATT
CAACTGGGCA AAATGGATTA CCTCTACGAC AAAGTAGAAA TGTACGATGG CTTAAAAGAT
ATTATTCACG GTAAAAAGAA TACCGATGTA ATTGAAACTG TGCAGGCAGG CATGGCCGAT
ATAGAGCGAA ATATGCTGCA CTTTTTAGAG AACCACGACG AGCAGCGTAT TGCCAGTGAA
CCCTTTGCGG GCAGCCCAGA AATAGCCAAA CCGGCAATGG TAGTGTCTAC ACTTATCAGC
TCTTCACCGA CTATGTTGTA TTTTGGCCAA GAGGTTGGTG AGCAAGGTGC GCTAGATTCT
GGTTTTGGCA AACCTACGCG CACAACTATT TTTGACTATG CCGGTGTGCC TGCGCATCAG
CGTTGGATGA ACGGTGGTAA ATTTGACGGT GGTAAATTAA CCCCTCCCGA AAAAGCGCTG
CGGGCATTTT ATAGCGAGTT GCTGTTGCTC TCGGCTAGCC ACCCAGCAAT GCTTGGCCAG
TATCAATCTT TACACAGCTT TAACAAAAGC CACAGCCAAG CTTACCCGCT CAATGTTTTT
ACTTTTGCGC GCTGGGCCGA TACAGGCGAA AAGCTAATAG TGGTAAGCAA CTTCTCGAAT
ACTGAACCAG CCGATATTCA ATTGTATTTA CCGGCCAGCT TAACCGGCCA GTGGCAGTTA
CAAGCCAAAG ACTACCCACT AACAGATTTA TTGGGCGATT CACACGCTGC AGCGGTACTT
GAAGCTAAGC AGCTATTCAC TACGCATTTA CAGTTGGCGC CATTGGAATC GCGTGTATTG
GCGTTGAGTT TATAA
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| Protein sequence | MKRIIALCLL ACWVCSCSQP EVNAPEEAPE QMQGKPVVYQ MFTRLFGNKV ELNKPWGTKE
ENGVGKFADI NAQALTAIKE MGVSHVWYTG VLHHALIADY TEYGLTNDDP DVVKGRAGSP
YAVKDYYNVN PDLAVNPAKR MEEFEQLIAR THAHGLKVVI DIVPNHVARA YQSTNAPQGV
EDFGASDDTS VEYARDNNFY YVVGEPFKVP LAENGYKPLG GEAHPLSDGE FDENPAKWTG
NGSRLAQPKA DDWYETVKIN YGVRPDGSKD FPELPEDYRY KNAEAHYQFW QGKSVPSSWV
KFRQIAEFWI EKGVDGFRYD MAEMVPVEFW SYLNAHIKHQ RADFFLLAEI YNPAEYRNYI
QLGKMDYLYD KVEMYDGLKD IIHGKKNTDV IETVQAGMAD IERNMLHFLE NHDEQRIASE
PFAGSPEIAK PAMVVSTLIS SSPTMLYFGQ EVGEQGALDS GFGKPTRTTI FDYAGVPAHQ
RWMNGGKFDG GKLTPPEKAL RAFYSELLLL SASHPAMLGQ YQSLHSFNKS HSQAYPLNVF
TFARWADTGE KLIVVSNFSN TEPADIQLYL PASLTGQWQL QAKDYPLTDL LGDSHAAAVL
EAKQLFTTHL QLAPLESRVL ALSL
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