Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_0555 |
Symbol | |
ID | 3967898 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 676046 |
End bp | 676690 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637919618 |
Product | DNA-3-methyladenine glycosylase I |
Protein accession | YP_526031 |
Protein GI | 90020204 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2818] 3-methyladenine DNA glycosylase |
TIGRFAM ID | [TIGR00624] DNA-3-methyladenine glycosylase I |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 0.870987 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCAGCTG CCAAACAACC TAGCGTTAAA AAACGCCCCG CCAAACCTGC TACTAAAACA GCCGGCCCCG CGCAAGCCTG CCCTTGGTGC GGCAGCGACC CACTTTACGT GCACTATCAC GATACTGAAT GGGGTGTACC GGAATACGAT AACCAAGCCC TGCTAGCAAA ACTTATTCTA GATGGTGCGC AGGCAGGCTT AAGCTGGATA ACCATTCTAA AAAAGCGCGA CGGCTACTAC CGCGCCTTCG ATCAATTCAA CCCAGAAAAA ATGGCGCGTT ACACCGATGC CAAACTTGAA AAACTTATGC TCGATGAGGG CATAGTGCGC AATCGCTTAA AAATAAAAAG CGCCCGCCAA AACGCCCAAG CTTATTTACG CATAATGAAA AACGGCGGCC CCAACGGCGA AAAAGATTTC AGCGAATTTT TGTGGTCGTT TGTAGGCGGC CAACCCATCC AAAATAACTA CCACAGCATG AGCGACGTGC CGGCATACAG CCCAGAAGCC GAAGCCATGA GCAAAGCCCT AAAAAAAGCC GGCTTTAACT TTGTAGGCCC AACCATTGTG TACGCCTTTA TGCAGGCGGT GGGTATGGTG AACGATCACC TTGTGAGCTG CCCGCGACAT GCGGTGCTAT CTTAA
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Protein sequence | MSAAKQPSVK KRPAKPATKT AGPAQACPWC GSDPLYVHYH DTEWGVPEYD NQALLAKLIL DGAQAGLSWI TILKKRDGYY RAFDQFNPEK MARYTDAKLE KLMLDEGIVR NRLKIKSARQ NAQAYLRIMK NGGPNGEKDF SEFLWSFVGG QPIQNNYHSM SDVPAYSPEA EAMSKALKKA GFNFVGPTIV YAFMQAVGMV NDHLVSCPRH AVLS
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