| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0549 |
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| Symbol | |
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| ID | 3967892 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 670829 |
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| End bp | 671251 |
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| Gene Length | 423 bp |
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| Protein Length | 140 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637919612 |
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| Product | peptidoglycan-binding LysM |
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| Protein accession | YP_526025 |
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| Protein GI | 90020198 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.00118336 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGTATAT CCACAACAAT AAAAATAATT TTTTCAGCTC GAATTCTAAT CGCCCTCTTC
TCATTGGGGG TGATGGGTAA TAGCTATGCA GATTCGCTGC CGCTTATTCA GCTTTCACTT
AAGCCGCGTT TATGCGTGCT TTCTGAGGGG GAAGAGGTGT GTCGCGATAC TATCGAAATA
ACGTGGATTG CACAAAAGGC CCGCAGCTTG TGTTTGTATC AAGACGATAC CGACTCGCCA
CTACAATGTT GGGATGCTGC CCGCGAAGGA CGCTACACTA TTGAATTAGC CGCAAGTGAA
AATATTAATT TCTCGCTGCG CGAAAAAAAT GAAGACACGT TTTTGGTGAC GCAAGCTTTT
GAGGTTGTGC AAGAGTCCAC CAAGTACCGT CGGCGTAATC GCAACCCATG GAGTTTTTTC
TAG
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| Protein sequence | MGISTTIKII FSARILIALF SLGVMGNSYA DSLPLIQLSL KPRLCVLSEG EEVCRDTIEI
TWIAQKARSL CLYQDDTDSP LQCWDAAREG RYTIELAASE NINFSLREKN EDTFLVTQAF
EVVQESTKYR RRNRNPWSFF
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