| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0544 |
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| Symbol | |
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| ID | 3967887 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 663933 |
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| End bp | 665582 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637919607 |
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| Product | putative allophanate hydrolase |
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| Protein accession | YP_526020 |
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| Protein GI | 90020193 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1984] Allophanate hydrolase subunit 2
[COG2049] Allophanate hydrolase subunit 1 |
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| TIGRFAM ID | [TIGR00370] conserved hypothetical protein TIGR00370
[TIGR00724] biotin-dependent carboxylase uncharacterized domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00179093 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCACA TACAAACATT GCAGCGTATT AACGACCACA GCCTACTTGC TGCCTTTAGC
CAAGGTTTTA GCCAAGCCTT AAGCTACGGC CAAATAAGTC AGCTTGCCGG CTGGTTAAGA
CACAATATTA CCAGCATAAA AGAAGCGGTA CCGGCCTACA GCCAAGTATT CATTGAGTGG
GATGACACGC TAACCTATAT CGACATCAGC CAAGCGCTCA ACGCAGCGCT AAAAAATATA
CAAACGATTA CGCAGCCCCA TGCCACGGCA GAAGCCCCTC AGCCCTTAAC AGTACAAGTG
TGCTACCACC CAAGCGTAGC CCCCGACCTA TATAACGTGG CCACAACACT TGGCTTGAGC
GAACAAGACG TTATTCGCCA GCACCTAAAA GCAAACTACC AAATACAAGC CATTGGCTTT
ATGCCTGGCT TCGCCTACTT AGGTGGCCTG CCTGACAATT TGCGTATACC GCGCCGCGCC
AACCCTCGTA CGCAGGTGCC TGCCGGCAGT GTAGCCATAG CCGAAAACCA AACGGCGGTA
TACCCCTTAG CTGCCCCAGG TGGTTGGCAC TTAATTGGCT GTAGCCCAGC CCCGCTAGGG
GACCCAAACA TATTAGAAAG TGCACACAAA CAAAAAGAAA ATAACACCCT AAGCGTAGGC
AAAGCCGTTA AATTTGAGCA GATTAGTCTC GAGCAATTTA ATCGCATTGC GCAGCAGCGT
GAACAATCAA AACCTCAAAA CCATTTACCA TCACAAAGCA CATTTACCAC ACGCAACCCA
ACAAGCCACA TGACTATTTT GCAAACTGGG CCATTGGCCC TACTGCAAGA TACTGGACGC
AAGCAGGTGC AGCACTTAGG CGTAAGCCAG TGCGGCAGCT TAGACAACTA CGCCTACCAA
TGGGCCAATA AGTTATTAGG AAATGCCCCA AATAGCCCCG CCATAGAGAT AACGCTTGGC
CTGTTTAAAG CGCGCTTTAA CGCTCCTACT ACCATTGCCA TTGCAGGGGC AGATTGCCAC
GCAACGCTTA ACAACCGGCC ACTGCACAAC TGGGCCAGCC ACCGTGTAAA TACAGGTGAC
ACGCTCGCCT TTGGCGGCGC ACGCAGTGGT GCTCGCGCAT ATTTAGCGGT TGCAGGTGGG
TTTGAGTGTG CAACTTTGTT TGATAGCTGC GCAATGAACC CCAAAGAACA TTGGCCGCAA
ACAGCAAGCC AGTTAAGCGC CAAACAGAAT GTTGGCTATA GAAGTAACAG CCAGCCACCA
CTAAAAATGG CACCGTGGTA CAAACAGCCC AATTACCAAC AAGAGCTTGT ATTGAGGGTT
TACCCGAGCT ATCAATTTGA TCAGTTCGGC GCAAATGAAA TAGACAAGCT GTGCAGTGAG
AACTACCAGA TTCACTCCCA CAGCGACCGC ATGGGCTACC GCTTAGAAGG CGCAAATATT
CACTGGCAGC ACGGCGGTAT AAGCTCTGAG CCTATTGCCT TTGGCAGCGT GCAAATTCCA
CCAAGCGGGC AACCTATAGT GCTGCTTAAC GACAGGCAAA CCCTTGGGGG CTACCCTAAA
ATTGGTTGCG TAAAAGCGGA AGACTGCTGG CAATTAGCGC AGCGACAAGC AGGGCAAAGT
GTGCGATTTG AGTTTATAGA GTGGGATTAA
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| Protein sequence | MTHIQTLQRI NDHSLLAAFS QGFSQALSYG QISQLAGWLR HNITSIKEAV PAYSQVFIEW
DDTLTYIDIS QALNAALKNI QTITQPHATA EAPQPLTVQV CYHPSVAPDL YNVATTLGLS
EQDVIRQHLK ANYQIQAIGF MPGFAYLGGL PDNLRIPRRA NPRTQVPAGS VAIAENQTAV
YPLAAPGGWH LIGCSPAPLG DPNILESAHK QKENNTLSVG KAVKFEQISL EQFNRIAQQR
EQSKPQNHLP SQSTFTTRNP TSHMTILQTG PLALLQDTGR KQVQHLGVSQ CGSLDNYAYQ
WANKLLGNAP NSPAIEITLG LFKARFNAPT TIAIAGADCH ATLNNRPLHN WASHRVNTGD
TLAFGGARSG ARAYLAVAGG FECATLFDSC AMNPKEHWPQ TASQLSAKQN VGYRSNSQPP
LKMAPWYKQP NYQQELVLRV YPSYQFDQFG ANEIDKLCSE NYQIHSHSDR MGYRLEGANI
HWQHGGISSE PIAFGSVQIP PSGQPIVLLN DRQTLGGYPK IGCVKAEDCW QLAQRQAGQS
VRFEFIEWD
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