| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0540 |
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| Symbol | |
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| ID | 3967883 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 661006 |
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| End bp | 662073 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637919603 |
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| Product | alpha amylase domain-containing protein |
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| Protein accession | YP_526016 |
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| Protein GI | 90020189 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.000140563 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATAA AATTAATTGC ATGTATCGCA CTTTTGCACT CAGCAAGTTT GGTGAGTGCA
CACGAGTCGG CACTGCGGGC TGATTCTCAC GCGCCTATAG GTATTATGGG CGACCATATG
CATAAACAGG GCGAGTGGAT GGTGTCTTAT CGTTATATGT CTATGGCGAT GTCTGGCAAC
TTACTGGGTG ACAGCAGTAT AAGCGACGAT GAAATAGTGA CTACACAACC CAACCCCTAT
GCGGCTATGC CTATGATGCC GCCCACGCTG CGGGTGGTGC CTCAAGAAAT GACAACTGCC
ATGCATATGG TGGGGGTGAT GTACGCGCCT ACAGACGATA TTACCTTGAT GGCTATGTTT
AACTACTTGG ATAAAACCAT GCAGTTAAAA ACCTACCAAG GCATGATGGG TACTACGGAG
CTTGGCTATT TCGACAGCGC TTCCAGCGGT ATGGGCGATA CAAAGCTAGG TTTGATGTAC
CGCCTATTTG ACGACGCCAC GCACCACCTG CACGCCAATT TAAGCGTTAG CTTACCAACG
GGCGCTATAG ATAAAACAGG CGAAGTACTA ACGCCCATGA ATATGCGTAT GCAAACACGC
TTGCCTTACC CTATGCAGTT GGGGTCGGGC ACTGTGGATT GGCAGCCAGG TATGACTTAT
ACCGGCAAAG CGGGTGATGT GACTTGGGGC ACGCAATATA TGTTAACCCT GCGCAGTAGC
GAAAATGATG AAGGGTATCA GCTAGGCAAC GAGCAAAAAT TGAGTGCGTG GGGGCAGTAT
GCAATTAGTC ACAGTGTAAG TGTGGGCGCG GGTGGCGAGT ATTTTTCATC GGATGCGATT
AGCGGTGTGG ATGATGAAAT AATGCTACCG GTTCAAACAG CCAACCCAGC TAATTATGGC
CGCGATGTGA TTAACGCTAA AGTGAGCTTG AATTGGGTTG GGCAAACCGG TCTTCTGCGC
GACCACCGCC TAGCCGTTGA GTACAGCGTG CCAATGAAGC AAGATGTAAA CGGCCTACAA
ATGGAAATGG ATTCCATGTT TACTTTCGGC TATCAAAAAG CGTTTTAG
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| Protein sequence | MKIKLIACIA LLHSASLVSA HESALRADSH APIGIMGDHM HKQGEWMVSY RYMSMAMSGN
LLGDSSISDD EIVTTQPNPY AAMPMMPPTL RVVPQEMTTA MHMVGVMYAP TDDITLMAMF
NYLDKTMQLK TYQGMMGTTE LGYFDSASSG MGDTKLGLMY RLFDDATHHL HANLSVSLPT
GAIDKTGEVL TPMNMRMQTR LPYPMQLGSG TVDWQPGMTY TGKAGDVTWG TQYMLTLRSS
ENDEGYQLGN EQKLSAWGQY AISHSVSVGA GGEYFSSDAI SGVDDEIMLP VQTANPANYG
RDVINAKVSL NWVGQTGLLR DHRLAVEYSV PMKQDVNGLQ MEMDSMFTFG YQKAF
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