Gene Sde_0533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_0533 
Symbol 
ID3968774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp655180 
End bp655662 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content46% 
IMG OID637919596 
Productputative nucleotide-binding protein 
Protein accessionYP_526009 
Protein GI90020182 
COG category[S] Function unknown 
COG ID[COG1666] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGTCTT TCGATATTGT TTCTGAAGTA GATGAACAAG AAGTTCGTAA CGCCGTTGAA 
AACGCTACCC GCGAGCTGAG CACACGCTTT GACTTTCGCG GCGTAGATGC GAGCTTTGAG
TGGAAAACCG ATCAAACCAC TATGCGTGCA GAGGGCGATT TTCAGCTGGG CCAAATGTTA
GACATTTTGC GCAATAAATT GGTTAAGCGC GGCGTCGACC CAGAATCTAT AGATACCAGC
ACACCGGTAC ACTCGGGTAA AAGTTGGAGC CAAGTTGTTA CCTTTAAAAA TGGTATTGAA
GCCAGCGTTG CCAAAAAAGT GGTTAAAGCC ATTAAAGACA GCAAAATTAA GGTACAAGTG
GCTATTCAAG GTGAAGAAGT ACGCGTTACG GGTAAAAAGC GCGACGATCT GCAAGAGGTT
ATGGCTTTGG TGCGCAACGG TGAGCTAGGG CAACCGTTTC AGTTTAAAAA CTTCCGCGAT
TAA
 
Protein sequence
MPSFDIVSEV DEQEVRNAVE NATRELSTRF DFRGVDASFE WKTDQTTMRA EGDFQLGQML 
DILRNKLVKR GVDPESIDTS TPVHSGKSWS QVVTFKNGIE ASVAKKVVKA IKDSKIKVQV
AIQGEEVRVT GKKRDDLQEV MALVRNGELG QPFQFKNFRD