Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_0533 |
Symbol | |
ID | 3968774 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 655180 |
End bp | 655662 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637919596 |
Product | putative nucleotide-binding protein |
Protein accession | YP_526009 |
Protein GI | 90020182 |
COG category | [S] Function unknown |
COG ID | [COG1666] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGTCTT TCGATATTGT TTCTGAAGTA GATGAACAAG AAGTTCGTAA CGCCGTTGAA AACGCTACCC GCGAGCTGAG CACACGCTTT GACTTTCGCG GCGTAGATGC GAGCTTTGAG TGGAAAACCG ATCAAACCAC TATGCGTGCA GAGGGCGATT TTCAGCTGGG CCAAATGTTA GACATTTTGC GCAATAAATT GGTTAAGCGC GGCGTCGACC CAGAATCTAT AGATACCAGC ACACCGGTAC ACTCGGGTAA AAGTTGGAGC CAAGTTGTTA CCTTTAAAAA TGGTATTGAA GCCAGCGTTG CCAAAAAAGT GGTTAAAGCC ATTAAAGACA GCAAAATTAA GGTACAAGTG GCTATTCAAG GTGAAGAAGT ACGCGTTACG GGTAAAAAGC GCGACGATCT GCAAGAGGTT ATGGCTTTGG TGCGCAACGG TGAGCTAGGG CAACCGTTTC AGTTTAAAAA CTTCCGCGAT TAA
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Protein sequence | MPSFDIVSEV DEQEVRNAVE NATRELSTRF DFRGVDASFE WKTDQTTMRA EGDFQLGQML DILRNKLVKR GVDPESIDTS TPVHSGKSWS QVVTFKNGIE ASVAKKVVKA IKDSKIKVQV AIQGEEVRVT GKKRDDLQEV MALVRNGELG QPFQFKNFRD
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