| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0526 |
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| Symbol | |
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| ID | 3968767 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 650063 |
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| End bp | 651889 |
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| Gene Length | 1827 bp |
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| Protein Length | 608 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637919589 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_526002 |
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| Protein GI | 90020175 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTTCAT TTTTTGAATC ACTTATTAAG CCATTCCCCA GCGAGCCGCC ACAGCAACCG
CCCAATACGC TCAAGGCGTT TATCTTACAT TACGCCAATG GCACTCGGCG GTTTTTAACC
GCGCTGGGGT TATTCACCAT GCTTATCGCC ATACTTGAAG TGTCGCTATT TAACTTTTTA
GGCAATTTGG TTGATAACTT AAACAACTCA AGCCCAACAA CCTACTGGCA AACCCACGGC
CGCGACCTAC TATTTTATGG CCTTCCCGTA CTACTGGGGC TGCCTCTGTG CGTGTTTATT
CACTCGCTAA TATTGCATCA AACACTGCTT GGCAACTTTG CCATGCGCGT GCGTTGGTTA
GCCCACAGAC ACCTACTCGG CCAAAGCGTG GCGTTTTACC AAAACGAATT TGCCGGGCGC
ATGGCCACCA AAGTAATGCA AACAGCCCTC TCTGTGCGCG AAGCCATTAT TAAATTGCTG
GATGTTATTT TATATGTGGC AGTGTTTTTT GCCGGTGTGC TTACCCTGCT GGCCACTCTC
GATTTGCGCT TGGCTATTCC GCTAACCGTT TGGATTATTA TTTACGTAAG CATTCTAAAA
TATTTTTTAC CAAGGCTCGC GCGCGTGTCG TCGCTTCAAG CCGATGCTCG CTCAGACATG
ACTGGGCGCA TTGTCGACAC CTACACCAAC ATTAATACTG TAAAACTGTT TTCGCACAGC
CAGCGCGAAG AACACTACGC CCGCGAAGGC ATGGAAAATT TCTTACAAAC GGTTCACCCT
CAAATGCGCC TGGTAACCAA ATTAAGCACC AGTGTTTGGT CGCTTAACGC GGTACTCATT
TTTTGTACTA CGTCACTTTC TATTTGGTTG TGGGCTAATA ACGCTATTAC CACTGGCAGC
ATTGCAATTG CCGTGGGCTT AGTACTGCGC ATGTACGGTA TGTCGCAATG GATAATGTGG
GAAGTATCTG GGCTGTTTGA AAACTTAGGC ACCGCGCGCG ACGGTATGAA CACGCTGGCA
GTAGAACGCT CAGTTTTAGA TTCCGAGCAA GCCGCGCCTA TTGCCATTAC CAAAGGCAAA
ATAGCTTACA ACAATGTTTC GTTTCACTAC GGTAAAGAAA ACGGCGTGAT TGAAAACTTT
AACTTAACCA TCGCACCCGG TGAAAAAATT GGTTTAGTTG GCCGGTCAGG TGCGGGGAAA
TCGACACTGG TTAATTTGCT TTTACGCTTT TACGATATAG AGAGCGGCAG CATTACTATC
GATAACCAAA ATATCGCCAC ACATCAACAG GAATCTTTGC GACAGCATAT TGCCATGGTT
ACACAAGACA CCTCTCTACT ACACCGCTCG GTGCGCGATA ATTTACTTTA CGGCAACCCC
ACTGCGAGTG AAGAACAAAT GCTGCTCGCC GCGCAGCGAG CCAAAGCACA CGAATTTATT
TTAGAGCTAG AAGACGGCCA AGGCCGAAAG GGCTACGACG CCCATGTGGG CGAACGCGGG
GTAAAACTTT CAGGCGGCCA ACGTCAACGT ATAGCCATTG CGCGAGCCTT CTTAAAAGAT
GCGCCTATTT TGGTATTAGA TGAAGCGACC TCGGCATTAG ATTCTGAAGT TGAATCGGCC
ATCCAAGAAA ACCTCAATCA ACTAATGCAA GGTAAAACAG TTATTGCTAT TGCCCATAGG
CTTTCTACCA TTGCCGCATT AGATAAACTT GTGGTGATAG ATCAAGGAAA TATAATCGAG
CACGGTACGC ATAAAGAATT GCTTGCTGCT AACGGCACCT ACGCAAAACT TTGGCAACAT
CAATCTGGCG GTTTTTTAGG GGAATAA
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| Protein sequence | MFSFFESLIK PFPSEPPQQP PNTLKAFILH YANGTRRFLT ALGLFTMLIA ILEVSLFNFL
GNLVDNLNNS SPTTYWQTHG RDLLFYGLPV LLGLPLCVFI HSLILHQTLL GNFAMRVRWL
AHRHLLGQSV AFYQNEFAGR MATKVMQTAL SVREAIIKLL DVILYVAVFF AGVLTLLATL
DLRLAIPLTV WIIIYVSILK YFLPRLARVS SLQADARSDM TGRIVDTYTN INTVKLFSHS
QREEHYAREG MENFLQTVHP QMRLVTKLST SVWSLNAVLI FCTTSLSIWL WANNAITTGS
IAIAVGLVLR MYGMSQWIMW EVSGLFENLG TARDGMNTLA VERSVLDSEQ AAPIAITKGK
IAYNNVSFHY GKENGVIENF NLTIAPGEKI GLVGRSGAGK STLVNLLLRF YDIESGSITI
DNQNIATHQQ ESLRQHIAMV TQDTSLLHRS VRDNLLYGNP TASEEQMLLA AQRAKAHEFI
LELEDGQGRK GYDAHVGERG VKLSGGQRQR IAIARAFLKD APILVLDEAT SALDSEVESA
IQENLNQLMQ GKTVIAIAHR LSTIAALDKL VVIDQGNIIE HGTHKELLAA NGTYAKLWQH
QSGGFLGE
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