| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0515 |
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| Symbol | |
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| ID | 3965629 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 632693 |
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| End bp | 635932 |
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| Gene Length | 3240 bp |
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| Protein Length | 1079 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637919578 |
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| Product | ATPase-like |
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| Protein accession | YP_525991 |
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| Protein GI | 90020164 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3899] Predicted ATPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.413543 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAAATT CGGATGGACG GGTAGCGCTC GATAGAGACA AGCTAAAGGC GCATCGCCGC
AAACTGGGGC TTAGTCAAGA GCAAATGGCC TTTCTATGTG CAGAGCAGGG CCTGTACGTG
TCTATCGCGT CGCTTAAACG TGCCGAAGCC CAAAAGCGAG TTTTGTATCG CACTGCGCGC
GACATAAGTG AGTTCTTTGG GGTATCGCTA GAAAGCATTT TGTTGCAGCC TGAAAAGCTC
AGTTCTACAT CTGAAAGGGA CAACACCGGC ACAATTGATG TGTACCGAAC TGTGGTGTTA
ACCAATATTC TTTATGAGGA TGGGGTAAGC GAGCTAAATA TCGATGCTTA TTCTCAGGTG
TCGACAATTC TTCACGAATA CCGCTTAGAT GTTGTGAGCA ATACTAAGAG CGGGCTTATT
TTATCTTCCA AAACGTCTTA TTCCGATGGC AACGAACCGC TGCGAGCTTG TTACGGTGCG
AAACAACTGT TGACGGTGTT ACCTGCACTT ATAGGTCGAC GTTGTGCTGC GGTAATTACT
GGGCAAAATA CGCCATTTTC GGAACATGAA TATGCGCATT CCCAATTGGG TGTTTGTGCG
AGTACATTTT TCAATAATGG CGGTAGTGCT ATATATGTTG GTGAAGAGCT AAAACCAATT
GTCGCGCGCT ATATTCACTG CCAAGAATGG GATAATGCAC CCAGTGAATT GTCGGCCTGC
TTTAGTCGGC TTGTGTTTGA ATGCTCGTCG GAAGTGCAGC AGTTGGCATT GGCGGGTAGG
CAGTTAGAGC TGTATCAGTT TCGCTCCATT ATCGATTCCA CCAAAAATTA CCGAGCGGCG
CAGGTTTTTT GTTTAAATGG GGTTGCTGGT ATTGGTAAAA CGCGTTTACT TAAAGAATGT
GTGCACATTG CCGGTGGTGA GGGCTATGTG TGTGCCGAGC TAACCGCTTT AGATCTTCGC
GGTATTCATA ATGCTAAGCT CATTAGTCAG GTAGTGCGCA AACTATTGGC GCTAGATAGT
GCAACATTAA ATATCGATGC GCCCGAAATG GGGTCGTGTC GACGATTGCT TACCGATCAT
GAAAATAGAT TGCTAAGGGC GTTAGAAAAA GAAGACCTAG ATGAAGAAAT CCAGCTCTCA
TTTGGCTTAA TGTCGCATCA CGAGATAGTA GAGCAGCAAA TCCAGCTGTG CGTAAAACTT
ACGCGGCATG TTTGTCAGCG CAGCCCTGTA TTACTGTGTT TTGAAGATTT ACATTGGGCG
GATCAAAGTG CATTAGACTT TTTAGCGCAA TGGATTCCAT TAATTAAAGA TCAAGCAATT
GTTATTTTAT GCACGCATCG CCCTGAAGAG CACATTATCG ATGCGATGAA TCATTTAGCG
CTTTCGGCTC CGTTATCTAC TGTAAACTTG GCTCCGCTAT CGTTACAGGA TGCGCAGTTT
ATAGCCCAGC AAATTACCAA TAAATACGAC TATCAGCACC TGTGTATATC TAAGGCACAG
GGCAATCCTC TCTTCCTCGA ACAACTTTTG CGTACAGAGT TTACCGATAA GCAGCAGTTG
CCGTATACCA TTCAAACGTT AATAACCGCC AAGTTAGATC AGTTAAAAGC AGTAGATCGA
CTTGCTGTAC TTGCGGCTTC TGCGGTTGGC CAAAAGTTTC CCTTGGATAT TATTCGTTTC
CTAACTGGAA ATGATCAGTA TCAGCCCACT GAGCTTATCA AAAGTTTTTT AATATCGAGC
GCCACTGGCG GCTATAGTTT TAATCACGCG TTAATATGTG ACGGAATTTA TCAATCAATA
CAAGACGAAG CCAAGCACGA TTTAAACCTA AGATGCGCGC AGTGGTATGC CGATAAAGAT
ACAACTTTAG AGCTGCGTTA CTTATTTAGA ATTAAAAGTA CGAGTATTGC TAGTAAGCTG
CCGACGGCTG TAGATAAACT TATTAAAAAC TTTCGCTTCG ACCTTGCTCT AGAATTTATA
AATAGTGCGC TTGAGGATGG CGTAGAAGGG TTAGATAAAT TTCAAACTCT TTATACCAAA
GCCGATATTC ACAATAAGCT AGGCCAGTTT AAATTGGCGG CAGAGCTTGC CGAGAAAGCG
TTAGCGCATG CTGCATCACC CGCCGACAAG GTAGAAGCCT TATTGCTTAA TGCCAATGCA
TTAAATACTT TAGATTGTTT CGATAGCGCC TTAGCAAGTT TGGTGCGGGC AGAAGAAATA
GCTAATCAGT ATTCAATGCC TAGCAAACTT GCTCGTATTT ATTACTTGAA GGGCAATTTC
TTTTTCCCGA AAGGTGATAT CGATGTTTGT TTGCATAATC ACAAGCAAGC GCTAGAGTAT
GCGAAACAGG CGCGAGACCT CGAAATGCAA GCGCGTGCGT TGGGTGGTTT ATGCGATGCC
GCTTATGCCG GCGGAAAAAT GTATAGCGCC TACGGTTATG TGCGTGAGTG CTTAGAAATT
AGCGAGAATC ATGATTTTAA AACAGTTATA GCCTCCAATT TATTTATGCT TGGCACTGTG
CGTATTTATC AAAATCAATC TAAGCAGGCC CTGCGCGATA CGCTCAACGG TATTGAGCTG
ACTCGGCTGG TGGGGCATTC GCGCGCGGAG ATAGTGTCAC GTTTAACCGC CGCATGGGTT
TACTTGGATA TGCTGGAGCT ATCTGAAGCA AAGTATCAAA TAGACGCTGC TATTAGCCTT
GCAAAAAATG TTGGGGCGAA GCGATTTATT CCCTTCTTGC AAGAAAGCTT AGCCCGAGCA
GAGTATTTAG ACGGTAACTA TGATGCCGCT GCTGCGGTTA TTGAAGAAGC GATTCCTCAA
GTAGAAATAT TAAGTGCCCA GCAATTTATA GGGCCTTGGG TATACGCTAC AGCAGCATTA
GTTGGCGATA ATACAGAGGT TACCAAAAGC TATTTAGCCA AAGGTGATGA GCTGCTTGCC
GGAGGTTGTA TCGGCCACAA TTATTTTAGA TTTTATGTGC TGGCTATGGA GTCTTGTATC
CGTTGGCAGA TGTGGGCTGA GCTGGATTAT TATAAACAAC AACTTATTGA CTATACGCGC
GAAGAGCCTA CACCCTGGTC GCAGTATTAT ATTCAGCGTG CGACGTTAAT ACTTAAAAGC
CAAACTGAAG ATGTATCGCA AGGTGATGTG CGATCACTTA TTTTACAGGC ACAAGAGGCG
GGGTTACTTT CATCGGTTAA CGCTCTGAGC GCTTTGCTAG AGAGTAAATT AGGGCAATAG
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| Protein sequence | MINSDGRVAL DRDKLKAHRR KLGLSQEQMA FLCAEQGLYV SIASLKRAEA QKRVLYRTAR
DISEFFGVSL ESILLQPEKL SSTSERDNTG TIDVYRTVVL TNILYEDGVS ELNIDAYSQV
STILHEYRLD VVSNTKSGLI LSSKTSYSDG NEPLRACYGA KQLLTVLPAL IGRRCAAVIT
GQNTPFSEHE YAHSQLGVCA STFFNNGGSA IYVGEELKPI VARYIHCQEW DNAPSELSAC
FSRLVFECSS EVQQLALAGR QLELYQFRSI IDSTKNYRAA QVFCLNGVAG IGKTRLLKEC
VHIAGGEGYV CAELTALDLR GIHNAKLISQ VVRKLLALDS ATLNIDAPEM GSCRRLLTDH
ENRLLRALEK EDLDEEIQLS FGLMSHHEIV EQQIQLCVKL TRHVCQRSPV LLCFEDLHWA
DQSALDFLAQ WIPLIKDQAI VILCTHRPEE HIIDAMNHLA LSAPLSTVNL APLSLQDAQF
IAQQITNKYD YQHLCISKAQ GNPLFLEQLL RTEFTDKQQL PYTIQTLITA KLDQLKAVDR
LAVLAASAVG QKFPLDIIRF LTGNDQYQPT ELIKSFLISS ATGGYSFNHA LICDGIYQSI
QDEAKHDLNL RCAQWYADKD TTLELRYLFR IKSTSIASKL PTAVDKLIKN FRFDLALEFI
NSALEDGVEG LDKFQTLYTK ADIHNKLGQF KLAAELAEKA LAHAASPADK VEALLLNANA
LNTLDCFDSA LASLVRAEEI ANQYSMPSKL ARIYYLKGNF FFPKGDIDVC LHNHKQALEY
AKQARDLEMQ ARALGGLCDA AYAGGKMYSA YGYVRECLEI SENHDFKTVI ASNLFMLGTV
RIYQNQSKQA LRDTLNGIEL TRLVGHSRAE IVSRLTAAWV YLDMLELSEA KYQIDAAISL
AKNVGAKRFI PFLQESLARA EYLDGNYDAA AAVIEEAIPQ VEILSAQQFI GPWVYATAAL
VGDNTEVTKS YLAKGDELLA GGCIGHNYFR FYVLAMESCI RWQMWAELDY YKQQLIDYTR
EEPTPWSQYY IQRATLILKS QTEDVSQGDV RSLILQAQEA GLLSSVNALS ALLESKLGQ
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